Pairwise Alignments

Query, 528 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

Subject, 440 a.a., flagellar hook protein FlgE from Phaeobacter inhibens DSM 17395

 Score =  103 bits (257), Expect = 1e-26
 Identities = 125/541 (23%), Positives = 204/541 (37%), Gaps = 128/541 (23%)

Query: 2   SFNIGLSGLRAASKDLNVTGNNIANAGTVGFKQSRAEFSDVYAASVLGTGKNPQGSGVLM 61
           S N G++GL A +  L    +NIANA T G+K+ + +F  +                 +M
Sbjct: 13  SLNAGVAGLSANASRLASISDNIANASTPGYKRVQTDFHSM-----------------VM 55

Query: 62  SNISQQFNQGNINYTQNALDLAINGNGFFQISNNGAVSYTRAGYFGTDRSGFLVDNFGYK 121
           S+    ++ G +  T   L   I+  G    ++N            TD +          
Sbjct: 56  SSSGGAYSAGGVRTTNVRL---IDERGPLVTTSNA-----------TDLA---------- 91

Query: 122 LQGFPVDGNGNLQNGVIGDLQIQTTNQAPKATSQINTAFN---LNSTQKSPVT--WQSAY 176
                V G G L    I +++   TN     T+  +   N   L +T+   V   W +  
Sbjct: 92  -----VRGRGMLPVASINEVETGATNPQMMLTTTASFRTNADGLLATESGLVLMGWPAQS 146

Query: 177 DASLQPAYDAAYNTSLTTAGQAAYDAEFAVSGDPALAEDARAAALVNATNITNAQAAGNA 236
           D ++ P     Y    + A +        +SG+P             AT  T+A  + N 
Sbjct: 147 DGTIPP-----YARDTSDALEPVRFNVNKLSGEPTTEMSLGVNLPATATESTSAGTSENL 201

Query: 237 AKALPANQAAALTAANGTFNPADPTTYNSSTSLNIYDSQGNAHVMTQYFVKT-----SAN 291
                                          S+  YD+ G +  +   FV T      +N
Sbjct: 202 -------------------------------SIEYYDNLGKSESLQIEFVPTVPGTGESN 230

Query: 292 TWDMKVLIDGRNPASPAQEPPQPYVMGLTFD----ASGALTAIDNGGSGLFSVSPDRKVT 347
            W M ++ D     +P  E        LTFD    + GAL A+     G ++        
Sbjct: 231 EWTM-IITDTATGGTPIGE------YTLTFDDNRTSGGALNAVTATTGGAYA-------- 275

Query: 348 LNSATGNPPSGGWIPAISNGATPATWSANGALANPGGIVLDFSKSTQYASAFAVNSVAQD 407
                  P +G  I  ++ G         G L +  G+       TQ +  FA  S+++D
Sbjct: 276 -------PATGSIIVTVAGGPMEINI---GTLGDDNGL-------TQLSDTFAPASISKD 318

Query: 408 GYTTGELAGLEIDDTGVIFARYTNGQSKVQGQIILANFANVQGLTPVGKTQWVQSFESGE 467
           G   G   G+EID+ G + A Y  G S+V  Q+ L +  N  G+  + +  ++ S ESG 
Sbjct: 319 GAPVGNFTGVEIDEAGFVHANYDTGVSRVVYQVPLVDLPNPNGMIAMDRQTYMPSSESGS 378

Query: 468 PVVGTPGSGTLGALQAGALEDSNVELSDQLVNLIVAQRNYQANAKTIETESAITQTIINL 527
             +   G G  G +   A E+S  +++ +L N+I  QR Y +NAK I+T   + Q   N+
Sbjct: 379 YFLWNAGEGPTGDILGYAREESATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTNI 438

Query: 528 R 528
           +
Sbjct: 439 K 439