Pairwise Alignments

Query, 528 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

Subject, 432 a.a., flagellar hook protein FlgE from Herbaspirillum seropedicae SmR1

 Score =  227 bits (579), Expect = 6e-64
 Identities = 177/538 (32%), Positives = 255/538 (47%), Gaps = 116/538 (21%)

Query: 1   MSFNIGLSGLRAASKDLNVTGNNIANAGTVGFKQSRAEFSDVYAASVLGTGKNPQGSGVL 60
           M F  GLSGL  A+K L+V GNN+ANA TVGFKQS+A+F+D+YA S+  +G +P G GV 
Sbjct: 1   MGFQQGLSGLNGAAKSLDVIGNNVANASTVGFKQSQAQFADMYANSMNRSGNSPVGIGVS 60

Query: 61  MSNISQQFNQGNINYTQNALDLAINGNGFFQISNNGAVSYTRAGYFGTDRSGFLVDNFGY 120
           +  ++QQ       +TQ          G    SNN                         
Sbjct: 61  VPAVAQQ-------FTQ----------GNISSSNNPL----------------------- 80

Query: 121 KLQGFPVDGNGNLQNGVIGDLQIQTTNQAPKATSQINTAFNLNSTQKSPVTWQSAYDASL 180
                 ++G+G  Q      L    TN++P      N  F L+         +S Y   +
Sbjct: 81  ---DIAINGDGFFQ------LSASLTNKSPMYGR--NGQFQLD---------KSGY--IV 118

Query: 181 QPAYDAAYNTSLTTAGQAAYDAEFAVSGDPALAEDARAAALVNATNITNAQAAGNAAKAL 240
            P+ + AY        Q          GDP   +   ++     T   + +   ++  ++
Sbjct: 119 NPSMNGAYLMGWAAGAQG---------GDPVPLQIDTSSIPATPTTTISTKVNLDSRLSV 169

Query: 241 PANQAAALTAANGTFNPADPTTYNSSTSLNIYDSQGNAHVMTQYFVKTS------ANTWD 294
           P             FN ADPT+YNSST +++YDS GN + M  Y+VK +        TW 
Sbjct: 170 PTTTP---------FNAADPTSYNSSTGVDLYDSLGNPYSMQTYYVKAAPTGTPPTTTWT 220

Query: 295 MKVLIDG---RNPASPAQEPPQPYVMG-LTFDASGALTAIDNGGSGLFSVSPDRKVTLNS 350
           +   ID     N A+PA     P  +G +TFD++G +T I+       ++SP    T N+
Sbjct: 221 VYAKIDNTTLNNGATPAV----PVALGTMTFDSTGTMTQINGA-----AISP----TNNT 267

Query: 351 ATGNPPSGGWIPAISNGATPATWSANGALANPGGIVLDFSKSTQYASAFAVNSVAQDGYT 410
            T           IS         A G  A P  I + +S STQ  SAF   +  Q+G  
Sbjct: 268 LT-----------ISTAQLATVAKAGGVFAAP--INISYSGSTQTGSAFVNLAQVQNGMP 314

Query: 411 TGELAGLEIDDTGVIFARYTNGQSKVQGQIILANFANVQGLTPVGKTQWVQSFESGEPVV 470
            G L+   +D  G I   Y+N Q+K  G ++L NFAN  GL P+G   +  S  +G P+V
Sbjct: 315 PGSLSSFSVDKDGSIIGSYSNQQTKNLGTVVLVNFANPNGLQPLGNNLYQASSAAGSPLV 374

Query: 471 GTPGSGTLGALQAGALEDSNVELSDQLVNLIVAQRNYQANAKTIETESAITQTIINLR 528
           G P +GT G LQA A EDSNV+L+ +LVN+IVAQR YQAN++TI+ +  + QT+++LR
Sbjct: 375 GKPTTGTFGTLQARAKEDSNVDLTAELVNMIVAQRVYQANSQTIKVQDTVLQTLVSLR 432