Pairwise Alignments

Query, 422 a.a., flagellar hook-associated protein 3 from Pseudomonas stutzeri RCH2

Subject, 397 a.a., flagellar hook-associated protein 3 from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (337), Expect = 5e-36
 Identities = 105/423 (24%), Positives = 196/423 (46%), Gaps = 36/423 (8%)

Query: 2   RISTVQAFNNGVAGLQRNYANATRTQEQISTGNRILTPADDPVASVRLLQLEQQQNVLSQ 61
           RIS+   +      ++R  +     Q Q+++G ++L+ +D+P+A+  +  + QQ+  L Q
Sbjct: 4   RISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQ 63

Query: 62  YNSNLTAAKNSLTQEEVTLNSVNTVLQRVRELAVQAGNGGLSADDRKSIAAELTEREDEL 121
           Y   +   +N L  +EV +++        +   ++  NG LS +DR + A  L E  +  
Sbjct: 64  YLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMANNF 123

Query: 122 LSLMNTRNARGEYLFSGFQGKTQPFVRDGAGSYSYQGDEGQRKLQIASSLNIAISDSGKS 181
           ++L N ++  G Y+F+G + K QPF RD  G+ +Y GD+ QRK++I++SL I  ++ G  
Sbjct: 124 INLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNPGSK 183

Query: 182 IFENVTNA-GRYLSSLDITGQPGSTLRVSTPLVQDEVAISGNPPFPAAGVGVRFTSDTEY 240
           +F  + N  G Y        +P   L+  + L+  E A++ NP             DT  
Sbjct: 184 VFMEIPNPFGSY--------EPNYALQEGSELLL-ERAVNLNP------------DDTAS 222

Query: 241 VVYDLAAAPDFANP-PIDPN-LVLASGVVDQQEKTTEKLVFRGVVVQFDGIPVGGETVEV 298
                   P+  N   ++ N  V+ +G  D +      + F  + +Q  G    G+ +E 
Sbjct: 223 YRVTFVDMPEGKNGYQLERNGSVVQAGEFDAK----TGIQFEELNIQVKGQISKGDAIE- 277

Query: 299 QLDPAVQKQGILETISNLRKALE--DPSSGNAGVRDAVAVALTNLDHGMISVDAARGNIG 356
                +  +         R A+   + S  +A     +   +       I ++  R +IG
Sbjct: 278 -----LTPRTTFSVFDTFRDAIRYAEGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIG 332

Query: 357 ARLNVIETTQTDNEDVTLVNKAVQAELRELDYAEALSRLSFQTIILEAAQQSYVKISGLN 416
           ARL+ ++  +  +ED  +     ++   +LDYAEA+   +  +  LEA+Q+++ K   L 
Sbjct: 333 ARLSTLDIQEEQHEDFKISLAKSKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLT 392

Query: 417 LFN 419
           LFN
Sbjct: 393 LFN 395