Pairwise Alignments

Query, 422 a.a., flagellar hook-associated protein 3 from Pseudomonas stutzeri RCH2

Subject, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

 Score = 51.6 bits (122), Expect = 4e-11
 Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 20/134 (14%)

Query: 17  QRNYANATRTQ----EQISTGNRILTPADDPVASVRLLQLEQQQNVLSQ--------YNS 64
           QR   +AT  Q    E++S+G +I +  DD       LQ+  + NV S+         N 
Sbjct: 15  QRYLTSATNAQQSSMERLSSGYKINSAKDDAAG----LQISNRLNVQSRGLGVAVRNAND 70

Query: 65  NLTAAKNSLTQEEVTLNSVNTVLQRVRELAVQAGNGGLSADDRKSIAAELTEREDELLSL 124
            ++ A+ +    E  +     +LQR+R+L++Q+ NG  S  DR +I  E+T   DEL  +
Sbjct: 71  GISMAQTA----EGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDELNRV 126

Query: 125 MNTRNARGEYLFSG 138
             T +  G  L +G
Sbjct: 127 AETTSFGGNKLLNG 140



 Score = 25.4 bits (54), Expect = 0.003
 Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 329 GVRDAVAVALTNLDHGMISVDAARGNIGARLNVIETTQTDNEDVTLVNKAVQAELRELDY 388
           G +++VA+    +D  +  VD+ R  +GA  N       + +++     A ++ +++ D+
Sbjct: 286 GAQESVAI----VDAALKYVDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDF 341

Query: 389 AEALSRLSFQTIILEAA 405
           A+  + L+   I+ +A+
Sbjct: 342 AKETTALTKAQILSQAS 358