Pairwise Alignments

Query, 422 a.a., flagellar hook-associated protein 3 from Pseudomonas stutzeri RCH2

Subject, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 10  NNGVAGL--QRNYANAT----RTQEQISTGNRILTPADDPVASVRLLQLEQQQNVLSQYN 63
           N  V+ L  QR+  +A+    ++ E++S+GNRI +  DD        +LE Q   L    
Sbjct: 6   NTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGIAV 65

Query: 64  SNLTAAKNSLTQEEVTLNSVNTVLQRVRELAVQAGNGGLSADDRKSIAAELTEREDELLS 123
            N     + +   E  +     +LQR+R+L++Q+ NG  SA +R ++  E+    DEL  
Sbjct: 66  RNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDELNR 125

Query: 124 LMNTRNARGEYLFSG 138
           +  T +  G  L +G
Sbjct: 126 IAETTSFAGRKLLNG 140



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 325 SGNAGVRDAVAVALTNLDHGMISVDAARGNIGARLNVIETTQTDNEDVTLVNKAVQAELR 384
           S   G + AV+V  T L +    VD  R  +GA  N  +   ++ ++V     A  + ++
Sbjct: 282 SSAGGAQRAVSVIDTALKY----VDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIK 337

Query: 385 ELDYAEALSRLSFQTIILEAA 405
           + DYA+  +++  Q I+ + +
Sbjct: 338 DADYAKETTQMIKQQILQQVS 358