Pairwise Alignments

Query, 104 a.a., competence protein ComEA helix-hairpin-helix repeat region from Pseudomonas stutzeri RCH2

Subject, 724 a.a., putative RNA binding protein with S1 RNA-binding domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 43.1 bits (100), Expect = 6e-09
 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 37  VTQASVNLNTADAATLTRELKGIGATKAKAIVDYREEHGPFSSVDELLEVKGIGSATLQK 96
           V    VNLNTA +  LT  + G+G   A+ IV++R E+G FSS  EL++V  +G+   ++
Sbjct: 490 VNLVGVNLNTASSHLLTY-ISGLGPQLAQNIVNFRAENGAFSSRKELMKVPRMGAKAFEQ 548

Query: 97  IRSQLSV 103
               L +
Sbjct: 549 CAGFLRI 555