Pairwise Alignments

Query, 270 a.a., shikimate 5-dehydrogenase from Pseudomonas stutzeri RCH2

Subject, 286 a.a., shikimate 5-dehydrogenase from Sinorhizobium meliloti 1021

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 78/277 (28%), Positives = 116/277 (41%), Gaps = 21/277 (7%)

Query: 5   GVFGNPIGHSKSPQIHALFAAQTGQVLRYEALLAPLDDFVG---------FARAFFQDGL 55
           G+ G  I  S +P +H    A  G  +RY+  L  L+  +G          A A  +   
Sbjct: 12  GLIGTGIQASLTPAMHMAEGAAQG--IRYDYELIDLN-LLGASEKDLPRLLADAERRGFA 68

Query: 56  GANVTVPFKEQAYRMTDQLTERARRAGAVNTLKKLEDGHLLGDNTDGAGLVSDLLHAGVA 115
           G N+T P K+      D+L   AR+ GAVNT+  L  G   G NTD  G           
Sbjct: 69  GLNITHPCKQAVIPYLDELASEARQLGAVNTV-VLRSGRRYGHNTDWWGFAEGFRRGLPD 127

Query: 116 LRGRRILLLGAGGAVRGALEPLLAQRPAALIIANRTVSKAEQLAQEFAELGP-LSASTFT 174
                 + LGAGGA        L+     L++ +R   +A+ LA+  + L P    +   
Sbjct: 128 ADLFSAVQLGAGGAGVATAYAALSLGLQRLVVFDREAGRAQALARMLSPLFPRAEVAAGN 187

Query: 175 DLAEPVDL-----IINGTSASLGGELPPLADSLIQPGHTFCYDMMYAAKPTAFCQWAAAL 229
           DL  P ++     +I+ T   +        D+ +     +  +++Y    TA  + A   
Sbjct: 188 DL--PSEMRNAAGLIHATPTGMAKYPGLPLDAELLSRSLWVAEIVYFPLETALLREARRR 245

Query: 230 GADTRDGLGMLVEQAAEAFELWRGVRPDTAPVLAELR 266
           G  T DG GM V QA  AF L+ G+ PD A +L   R
Sbjct: 246 GCKTLDGGGMAVFQAVGAFRLFTGLEPDAARMLGHFR 282