Pairwise Alignments

Query, 270 a.a., shikimate 5-dehydrogenase from Pseudomonas stutzeri RCH2

Subject, 315 a.a., shikimate 5-dehydrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  119 bits (297), Expect = 1e-31
 Identities = 98/274 (35%), Positives = 128/274 (46%), Gaps = 30/274 (10%)

Query: 4   YGVFGNPIGHSKSPQIHALFAAQTGQVLRYEAL-LAP--LDDFVGFARAFFQDGLGANVT 60
           YG+ G+P+GH+ SP +H    +       Y A  L P  + DF+   R       GA+VT
Sbjct: 12  YGIIGHPLGHTMSPLLHNWGFSLLDVPAVYMAWPLEPGRVGDFITAVRTL--PIRGASVT 69

Query: 61  VPFKEQAYRMTDQLTERARRAGAVNTLKKLEDGHLLGDNTDGAGLVSDLLH-AGVALRGR 119
           +P K+    + D +++RAR  GAVNTL    DG LLG+NTD  G ++ L   A    R  
Sbjct: 70  IPHKQAVLPLLDGVSDRARAVGAVNTLY-WRDGQLLGENTDVTGFLAPLRQRAAAGWRCE 128

Query: 120 RILLLGAGGAVRGALEPLLAQRPA------ALIIANRTVSKAEQLAQEF-AELGPLSAST 172
           R L+LG GGA R  L  L    PA      A+ +  R   KA  LA EF AE+    A  
Sbjct: 129 RALVLGNGGAARAVLAGLRELGPAGDGVVRAVGVTGRNAEKAAPLAAEFGAEVVDWDARV 188

Query: 173 FTDLAEPVDLIINGTSASLGGELPP---------LADSLIQPG---HTFCYDMMYAAKPT 220
                   DL++N T   + GE             A  +   G       YD++Y    T
Sbjct: 189 HWG----ADLVVNTTPMGMSGERQGDTAFPEQGFAAQGVAAGGDGRRGLAYDLVYNPLRT 244

Query: 221 AFCQWAAALGADTRDGLGMLVEQAAEAFELWRGV 254
            F   AA  G DT+DGLGM VEQ  E F LW G+
Sbjct: 245 RFLSEAADAGWDTQDGLGMFVEQGREQFRLWTGL 278