Pairwise Alignments

Query, 270 a.a., shikimate 5-dehydrogenase from Pseudomonas stutzeri RCH2

Subject, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis JJ

 Score =  111 bits (278), Expect = 1e-29
 Identities = 88/262 (33%), Positives = 125/262 (47%), Gaps = 14/262 (5%)

Query: 5   GVFGNPIGHSKSPQIHALFAAQTGQVLRYEALLAP---LDDFVGFARAFFQDGLGANVTV 61
           G+ G+PI HS SP +H           RY A       L D V  A+A   +  G NVT+
Sbjct: 10  GLIGHPIDHSFSPIMHNAAIKDLKINYRYFAFDVSEKNLKDVVTGAKAL--NFRGFNVTI 67

Query: 62  PFKEQAYRMTDQLTERARRAGAVNTLKKLEDGHLLGDNTDGAGLVSDLLHAGVALRGRRI 121
           P K    +  D++   A   GAVNT+K +E+G  +G NTDG G+   L      L  + I
Sbjct: 68  PHKVNIMKYLDEIDCDAEVIGAVNTVK-IENGKAIGYNTDGIGVKKALEEKTGILINKNI 126

Query: 122 LLLGAGGAVRGALEPLLAQRPAALIIANRTVSKAEQLAQEFAEL----GPLSASTFTDLA 177
           L++G+GGA R     L       L I NR + KAE L++E ++      PL+        
Sbjct: 127 LIIGSGGASRAVSFELAKDNN--LTIVNRNIEKAENLSKEISKKLKKENPLNYGGLDINI 184

Query: 178 EPVDLIINGTSASL--GGELPPLADSLIQPGHTFCYDMMYAAKPTAFCQWAAALGADTRD 235
           E  D+IIN T   +    E+ P+             D++Y      F + A   GA T +
Sbjct: 185 ENFDIIINTTPVGMYPNTEVDPVIPLHNIKKDAVVMDLIYNPLEPVFLKEAKKYGAKTIN 244

Query: 236 GLGMLVEQAAEAFELWRGVRPD 257
           G+GMLV Q A +FE+W G++PD
Sbjct: 245 GIGMLVYQGAVSFEIWTGIKPD 266