Pairwise Alignments

Query, 270 a.a., shikimate 5-dehydrogenase from Pseudomonas stutzeri RCH2

Subject, 271 a.a., shikimate 5-dehydrogenase from Herbaspirillum seropedicae SmR1

 Score =  309 bits (792), Expect = 4e-89
 Identities = 169/272 (62%), Positives = 197/272 (72%), Gaps = 4/272 (1%)

Query: 1   MDRYGVFGNPIGHSKSPQIHALFAAQTGQVLRYEALLAPLDDFVGFARAFFQ-DGLGANV 59
           MD Y V GNPI HSKSP IHA FAAQTGQ + YE LL PL  F    + F +  G GAN+
Sbjct: 1   MDEYVVIGNPIAHSKSPDIHARFAAQTGQSMSYERLLVPLHGFKAAVQVFQRRGGRGANI 60

Query: 60  TVPFKEQAYRMTDQLTERARRAGAVNTLKKLEDGHLLGDNTDGAGLVSDLL-HAGVALRG 118
           TVPFK +A+ + DQLTERAR AGAVNT K  E+G +LGDNTDGAGLV+D++ +AG AL+G
Sbjct: 61  TVPFKLEAHALADQLTERARLAGAVNTFK-FEEGCILGDNTDGAGLVTDIMVNAGQALQG 119

Query: 119 RRILLLGAGGAVRGALEPLLAQRPAALIIANRTVSKAEQLAQEFAELGPLSASTFTDLAE 178
           RRILLLGAGGA RGAL PLL QRPA L++ NRT S+AE+LA +FA  GP+ ++TF  L  
Sbjct: 120 RRILLLGAGGASRGALLPLLQQRPAELVVVNRTASRAEELATQFAAYGPVRSTTFAGLEG 179

Query: 179 PVDLIINGTSASLGGELPPLADSLIQPGHTFCYDMMYAAKPTAFCQWAAALGADTRDGLG 238
             D+I+N TSASL  +LPPL  S +    T  YDMMY   PT F Q A   GA  RDGLG
Sbjct: 180 AFDVIVNATSASLSDDLPPLPPS-VYGSETLAYDMMYGRGPTVFMQSAQQHGAHVRDGLG 238

Query: 239 MLVEQAAEAFELWRGVRPDTAPVLAELRRQLS 270
           MLVEQAAEAF+ WRGVRP TA V A LR+QLS
Sbjct: 239 MLVEQAAEAFQWWRGVRPATAEVFASLRQQLS 270