Pairwise Alignments

Query, 270 a.a., shikimate 5-dehydrogenase from Pseudomonas stutzeri RCH2

Subject, 278 a.a., shikimate 5-dehydrogenase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  142 bits (357), Expect = 1e-38
 Identities = 98/263 (37%), Positives = 135/263 (51%), Gaps = 6/263 (2%)

Query: 5   GVFGNPIGHSKSPQIHALFAAQTGQVLRYEALLAPLDDFVGFARAFFQDGL-GANVTVPF 63
           GV GNPI HS+SP +H  +    G    Y  L     D      A  + G  G NVT+PF
Sbjct: 10  GVIGNPITHSRSPHLHRHWLHVYGIEGYYVPLHVQGQDLAEVFHALPKLGFKGVNVTLPF 69

Query: 64  KEQAYRMTDQLTERARRAGAVNTLKKLEDGHLLGDNTDGAGLVSDLLHA--GVALRGRRI 121
           KE+A  + D++++RA   GA NT+    DG +  DNTDG G + +L +   G + R   I
Sbjct: 70  KERAIELADRVSDRAALIGAANTITFQPDGTIHADNTDGYGFIENLRNGAPGWSPRAAAI 129

Query: 122 LLLGAGGAVRGALEPLLAQRPAALIIANRTVSKAEQLAQEFA-ELGPLSASTFTDLAEPV 180
           ++LGAGGA RG L  LL      + +ANRT +KAE L  +F   +  +     +   E  
Sbjct: 130 VVLGAGGAARGVLSALLEAGAPEVRLANRTRAKAEALRSDFGPRVTVVDWHGVSGTMEDA 189

Query: 181 DLIINGTSASLGGELPPLADSL-IQPGHTFCYDMMYAAKPTAFCQWAAALGADTRDGLGM 239
           + ++N TS  + G+ P L  +L   P      D++Y    T   + A A G    DGLGM
Sbjct: 190 ETLVNTTSLGMTGQ-PDLELNLDALPRSAVVTDIVYRPLMTPLLEQAVARGNPVVDGLGM 248

Query: 240 LVEQAAEAFELWRGVRPDTAPVL 262
           L+ QAA  FE W GVRP+  P L
Sbjct: 249 LLFQAAPGFERWFGVRPEITPEL 271