Pairwise Alignments

Query, 694 a.a., C-terminal peptidase (prc) from Pseudomonas stutzeri RCH2

Subject, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

 Score =  545 bits (1405), Expect = e-159
 Identities = 310/695 (44%), Positives = 422/695 (60%), Gaps = 42/695 (6%)

Query: 1   MKRTLTCTVLAVLFGLHASLAMA-KAVSTPESWDYLQPDRDQVIASLNVVELLKRHHYNK 59
           MK     +++A    L A  A A +A   PE    L P+     A+  V     R HY +
Sbjct: 1   MKCRSKISLIAASLWLAAFSAQALEAKLKPEDLPLLVPEAQHATAAKRVTSRFTRSHYKQ 60

Query: 60  PPLNDARSAKIFDSYIQMLDPSRSYFLASDLEEFGKWRNQFDDFLKGGNLEPGFAIYKRH 119
             L+D  S  +F+ Y++MLD SR+ F  +D++ F  W  Q DD LK G+ +  + +Y   
Sbjct: 61  FNLDDQFSQAMFERYLEMLDYSRNIFTQADIDSFKAWSLQLDDQLKAGDNQIAYDLYNLS 120

Query: 120 LERLQNRLNYALGLLDKGVGSFDFTKDEELLIDREKAAWAKNMAELDDLWRKRVKDEVLR 179
           +E+   R  YAL LLD+      F  DE + +DR K+ W K++ E+++LWR+RVK + L 
Sbjct: 121 MEKRFERFQYALSLLDQ---EMTFDADESIELDRTKSPWPKDLKEINELWRQRVKYDALS 177

Query: 180 LKLAGKEPKAIEELLTKRYKNQLARLNQTRGEDVFQTYINAFAQSYDPHTQYLSPDNAEN 239
           LKLAGKE   I+E L KRY N + RL QT+ EDVFQTY+NAFA+  DPHT YLSP NAE 
Sbjct: 178 LKLAGKEWPEIKETLDKRYNNAIKRLTQTKSEDVFQTYMNAFAREVDPHTSYLSPRNAEQ 237

Query: 240 FDINMSLSLEGIGAVLQSDNEHVKIVRLVPAGPAEKSKQLAPADKIVGVGQANDEMVDVI 299
           F   M+LSLEGIGAVLQ  +++  I  LV  GPA  SKQL   D+I+GVGQ  +++VDV+
Sbjct: 238 FQSEMNLSLEGIGAVLQMTDDYTIIRSLVAGGPAALSKQLGEGDRIIGVGQEGEDVVDVV 297

Query: 300 GWRLDEVVKLIRGPKGSVVRLEVIPASNAPNDQSSKVVAITREAVKLEEQAAKKSVLNLE 359
           GWRLD+VV+LI+GPKGS V+L V+P      D  S VV I R+ ++LE++A K  V  +E
Sbjct: 298 GWRLDDVVQLIKGPKGSKVKLLVLPEG---KDAKSHVVTIVRDKIRLEDRAVKSEV--IE 352

Query: 360 HQGQSFKLGVIEIPAFYLDFKALRAGDQNYKSTTRDVKKLLSELEAEKVDGVVIDLRNNG 419
             G+  K+GV+E+P+FY+                +D +KLL+EL+A+KVDG+++DLRNNG
Sbjct: 353 KAGK--KIGVLEVPSFYV-------------GLAQDTEKLLAELKAKKVDGIIVDLRNNG 397

Query: 420 GGSLQEATELTGLFIDQGPTVLVRNSDGRVDVLADEQTGAYYKGPLAVLVNRLSASASEI 479
           GG+L EAT L+GLFI  GP V VR+S GRV+V +D      Y GP+ VL+NR SASASEI
Sbjct: 398 GGALTEATALSGLFITSGPVVQVRDSYGRVNVNSDTDGSISYSGPMTVLINRYSASASEI 457

Query: 480 FAGAMQDYHRALILGGQTFGKGTVQTIQPLNH---------GELKLTLAKFYRVSGQSTQ 530
           FA AMQDY RA+ILG  +FGKGTVQ  + LNH         G ++ T+ KFYR+ G STQ
Sbjct: 458 FAAAMQDYGRAIILGENSFGKGTVQQHRSLNHIYDLFDKELGYVQYTIQKFYRIDGGSTQ 517

Query: 531 HQGVIPDITYPADVDTKEIGESALPEALPWDSIRAAINPDMNPFKPFLAELKARHEARTG 590
           ++GV+PDI YP  +   E GES    ALPWDSI  A    +N F   +A L+A+H+ R  
Sbjct: 518 NKGVVPDIAYPTAIAPSETGESVEDNALPWDSIDKAKYERLNNFNTIIASLEAKHQQRVA 577

Query: 591 ENPDFVFTRDRLALAQELMHDTTVSLNEDKRRAQQADIEKRQLALENALRLAKGEQPLAK 650
            + +F F    +A  +    D  +SLNE  R+ + A  ++ +LA  N  + A G+   A 
Sbjct: 578 NDLEFGFIEQDIAKYRAEKDDNLLSLNEKVRKEESAKADEERLARINQRQKALGKSTYAS 637

Query: 651 LEKEDETTPHKETDKPKPEDDAYLSESGRILLDYL 685
           L+         +  K     DAYL ES  I+LD +
Sbjct: 638 LQ---------DIPKDYEAPDAYLDESVNIMLDMI 663