Pairwise Alignments

Query, 551 a.a., transporter, SSS family from Pseudomonas stutzeri RCH2

Subject, 492 a.a., sodium/proline symporter PutP from Methanococcus maripaludis S2

 Score =  152 bits (385), Expect = 2e-41
 Identities = 111/456 (24%), Positives = 211/456 (46%), Gaps = 31/456 (6%)

Query: 33  NYTAIIMFVVFIAFTMGITKWAAKRNTSTADYYTAGGSITGFQNGLAIAGDFMSAASFLG 92
           N + +++F++++   MG+  +  +RN + +DY   G  +  +   L+     MS    +G
Sbjct: 5   NLSIVLVFILYLLVVMGVGMYFYRRNETISDYVLGGRKLNSWVAALSAQASDMSGWLLMG 64

Query: 93  ISALVYTSGYDGLIYSIGFLVGWPIILFLMAERLRNLGKFTFSDVA-------SYRLGQT 145
           +  + Y SG   +   +G  +G  +    +AERLR   +     +         +R    
Sbjct: 65  LPGVAYLSGMSEIWIGVGLAIGTYLNWKFVAERLRRYTEIAKDSITIPVYLENRFRDQSK 124

Query: 146 QIRLLSAFGSLIVVAFYLIAQMVGAGKLIQLLFGLDYYVAVVLVGVLMVMYVLFGGMLAT 205
            +R++SAF  ++    Y  + +V  GKL  L+FG+DY +AV +  ++++ Y   GG LA 
Sbjct: 125 LLRIVSAFFIMLFFLLYTSSGLVAGGKLFNLVFGVDYTLAVTIGALVIIGYTFLGGFLAV 184

Query: 206 TWVQIIKAVLLLSGASFMAIMVMKSVGF-DFGSLFAEAVKIHEKGAQIMSP-GGLVSDPI 263
           +W   I+  L+     F+AI ++  +G    G + A     +      ++P   L  + +
Sbjct: 185 SWTDFIQGSLM-----FIAIFLIPIMGISQVGGIDATMNAWNSISPDYLNPFTNLDGESL 239

Query: 264 SAISLGLALMFGTA--GLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGF-GA 320
             + L  AL +G    G+PHIL+RF  +  A +  K+   AT ++     +  ++G  GA
Sbjct: 240 GIMGLASALAWGLGYFGMPHILVRFMAIKSADKVPKARKIATTWVVISLFMAVLVGMVGA 299

Query: 321 ILLVSTNPEFKDVTGAIVGGTNMVAIHLASAVGGNLFLGFISAVAFATILAVVAGLTLAG 380
           + L           GA +     V + +A  +  +L  G   A   A I++      L  
Sbjct: 300 VAL-----------GAPLDDPEHVFMAMAQGLFPSLIAGLFLAGVLAAIMSTADSQLLVT 348

Query: 381 ASAVSHDLYACVIKQGKAREEDEMRVTKLTTLTLGVVAILLGIIFEKQNIAFMVGLAFSI 440
           ASA++ D+YA + K   A +++ + +++   + +  +A    I+    ++  +V  A++ 
Sbjct: 349 ASAITEDIYALLNK--NASQKELLWISRFAVIVVAAIAYYFAIV-PGSSVMGLVSYAWAG 405

Query: 441 AASCNFPVLFLSMYWKGLSTRGALFGGSLGLFTALL 476
                 PV+ LS+YWK ++  GAL G   G F  +L
Sbjct: 406 FGGAFGPVILLSLYWKRMTRNGALAGLLSGGFMVIL 441