Pairwise Alignments

Query, 381 a.a., pilus retraction protein PilT from Pseudomonas stutzeri RCH2

Subject, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

 Score = 90.9 bits (224), Expect = 8e-23
 Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 55/239 (23%)

Query: 123 RGLVLFVGATGTGKSTSLASMIGYRNKNSSG-HIISIEDPIEFIHQHQSCIVTQREVGID 181
           +G++L  G TG+GK+ SL +  G R  N+S  +I + EDP+E      + +  Q ++G  
Sbjct: 317 QGMILMTGPTGSGKTVSLYT--GLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGF- 373

Query: 182 TSSFEVALKNTLRQAPDVILIGEIRTRETMDYAVAFAETGHLCLATLHANNANQALDRII 241
              F  AL++ LRQ PDV+++GEIR  ET + AV  A+TGHL L+TLH N+A + + R+ 
Sbjct: 374 --GFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLA 431

Query: 242 NFFPPDRHNQVWMDLSLNLKAIVAQQLVP------------------------------- 270
           N            +L+ +L  I+AQ+L                                 
Sbjct: 432 NMGVEP------FNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFAFQPNEILYEA 485

Query: 271 --------TPDGKGRRAVIEVL-INTPLAADLIRKGEVHELKSLMKRSTELGMQTFDQA 320
                   T    GR  + EV+  NT LA  ++++  +H+++ L K +   GMQT  ++
Sbjct: 486 NAAGCNECTGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKAN---GMQTLQES 541