Pairwise Alignments

Query, 381 a.a., pilus retraction protein PilT from Pseudomonas stutzeri RCH2

Subject, 345 a.a., type IV pili twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

 Score =  264 bits (674), Expect = 3e-75
 Identities = 134/334 (40%), Positives = 213/334 (63%), Gaps = 1/334 (0%)

Query: 1   MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKIMPVSKTAMSPEMTRETVHGVMNEQQR 60
           M+  +LL   V+   SDL ++AGVPP ++++G++  +   A +       +  +MN+ QR
Sbjct: 1   MDIAELLEFSVKHNASDLHLSAGVPPMVRIDGEVRKLGVPAFTHSDVHRLIFEIMNDAQR 60

Query: 61  REFTENHECNFAISARGIGRFRVSAFYQRNLAGMVLRRIETNIPTIEELKLPDVLKKLSM 120
            E+ E  E +F+     +GRFRV+AF+Q      V R I T IPT+E+L  P++  K++ 
Sbjct: 61  SEYEEKLEVDFSFELPNVGRFRVNAFHQARGCSAVFRTIPTVIPTLEQLDAPEIFSKIAN 120

Query: 121 TKRGLVLFVGATGTGKSTSLASMIGYRNKNSSGHIISIEDPIEFIHQHQSCIVTQREVGI 180
            ++GLVL  G TG+GKST+LA+M+ Y N + + HI++IEDPIEF+H +  C++ QREV  
Sbjct: 121 YEKGLVLVTGPTGSGKSTTLAAMVNYVNAHHNKHILTIEDPIEFVHSNNKCLINQREVHR 180

Query: 181 DTSSFEVALKNTLRQAPDVILIGEIRTRETMDYAVAFAETGHLCLATLHANNANQALDRI 240
           DT SF+ AL++ LR+ PDVIL+GE+R +ET+  A+  AETGHL   TLH ++A + +DRI
Sbjct: 181 DTHSFKNALRSALREDPDVILVGELRDQETISLALTAAETGHLVFGTLHTSSAAKTIDRI 240

Query: 241 INFFPPDRHNQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLINTPLAADLIRKGEVH 300
           I+ FP    + V   LS +L+A++AQ+L+    G GR A  E+++ TP   +LIR+ +V 
Sbjct: 241 IDVFPGSDKDMVRSMLSESLRAVIAQKLLKRVGG-GRVACHEIMLATPAIRNLIREDKVA 299

Query: 301 ELKSLMKRSTELGMQTFDQALYNLYVQGEITYED 334
           ++ S+++     GMQT +Q    L  +G +  ++
Sbjct: 300 QMYSIIQTGAAHGMQTMEQNAKQLIARGVVDAQE 333