Pairwise Alignments

Query, 344 a.a., pilus retraction protein PilT from Pseudomonas stutzeri RCH2

Subject, 345 a.a., type IV pili twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

 Score =  469 bits (1206), Expect = e-137
 Identities = 233/337 (69%), Positives = 275/337 (81%)

Query: 1   MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPAMDHKQVHALIYDIMNDKQR 60
           MDI ELL FS K  ASDLHLSAG+PPM+R+DG+VR++ +PA  H  VH LI++IMND QR
Sbjct: 1   MDIAELLEFSVKHNASDLHLSAGVPPMVRIDGEVRKLGVPAFTHSDVHRLIFEIMNDAQR 60

Query: 61  KDFEEFLETDFSFEVPGVARFRVNAFNQNRGSGAVFRTIPSKVLTMEDLGMGEVFRKITD 120
            ++EE LE DFSFE+P V RFRVNAF+Q RG  AVFRTIP+ + T+E L   E+F KI +
Sbjct: 61  SEYEEKLEVDFSFELPNVGRFRVNAFHQARGCSAVFRTIPTVIPTLEQLDAPEIFSKIAN 120

Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
             +GLVLVTGPTGSGKSTTLAAM++Y+N     HILTIEDPIEFVH + KCL+NQREVHR
Sbjct: 121 YEKGLVLVTGPTGSGKSTTLAAMVNYVNAHHNKHILTIEDPIEFVHSNNKCLINQREVHR 180

Query: 181 DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240
           DT  F  ALRSALREDPD+ILVGE+RD ETI LALTAAETGHLVFGTLHT+SAAKTIDR+
Sbjct: 181 DTHSFKNALRSALREDPDVILVGELRDQETISLALTAAETGHLVFGTLHTSSAAKTIDRI 240

Query: 241 VDVFPAEEKSMVRSMLSESLQAVISQTLLKKVGGGRVAAHEIMIGTPAIRNLIREDKVAQ 300
           +DVFP  +K MVRSMLSESL+AVI+Q LLK+VGGGRVA HEIM+ TPAIRNLIREDKVAQ
Sbjct: 241 IDVFPGSDKDMVRSMLSESLRAVIAQKLLKRVGGGRVACHEIMLATPAIRNLIREDKVAQ 300

Query: 301 MYSSIQTGGSLGMQTLDSCLKGLLAKGLISRDSAKEK 337
           MYS IQTG + GMQT++   K L+A+G++     + K
Sbjct: 301 MYSIIQTGAAHGMQTMEQNAKQLIARGVVDAQEVQSK 337