Pairwise Alignments

Query, 344 a.a., pilus retraction protein PilT from Pseudomonas stutzeri RCH2

Subject, 568 a.a., type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Dechlorosoma suillum PS

 Score =  133 bits (335), Expect = 1e-35
 Identities = 96/303 (31%), Positives = 163/303 (53%), Gaps = 28/303 (9%)

Query: 3   ITELLAFSAKQGASDLHLSAG---LPPMIRVDGDVRRINLPAMDHKQVHALIYDIMNDKQ 59
           I  +LA + K+ ASD+H       L    R+DG +R+I      +    A+   +M+   
Sbjct: 187 IDAILADAVKRDASDVHFEPEANFLRIRYRIDGMLRQIRALHKSYWPAMAVRIKVMSGMN 246

Query: 60  RKDFEEFLETDFSFEVPG-VARFRVNAFNQNRGSGAVFRTIPSK--VLTMEDLGMGE--- 113
             +     +   +  + G    FRV A     G   V R +  +  ++ +E LG+ E   
Sbjct: 247 IAETRAPQDGRINLVLSGRQVDFRVAAQPTIHGENVVLRILDRQKGIVPLEGLGLAEDHL 306

Query: 114 -VFRKITDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCL 172
            + + +   P G++LVTGPTGSGK+TTL ++L+++N+   + I+T+EDP+E+       L
Sbjct: 307 DLLKLMIARPEGIILVTGPTGSGKTTTLYSVLNHINSEGVN-IMTLEDPVEY----PMAL 361

Query: 173 VNQREVHRDT-LGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTT 231
           V Q  V     L F+  +RS +R+DPD+ILVGE+RD +T  +A  AA TGH V+ TLHT 
Sbjct: 362 VRQTSVAESAKLDFANGIRSMMRQDPDVILVGEIRDTDTAEMAFRAAMTGHQVYSTLHTN 421

Query: 232 SAAKTIDRVVDVFPAEEKSMVRSMLSESLQAVISQTLLKKVGGG-----RVAAHEI-MIG 285
           SA   I R++D+       ++  +++ ++  +++Q L++++  G     +  AHE  ++G
Sbjct: 422 SAIGAIPRLLDI------GILPDLMAGNIIGIVAQRLVRRLCPGCKTPYQAEAHESRLLG 475

Query: 286 TPA 288
            PA
Sbjct: 476 IPA 478