Pairwise Alignments

Query, 492 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

Subject, 487 a.a., Putative transport protein from Pseudomonas fluorescens FW300-N2E2

 Score =  174 bits (441), Expect = 6e-48
 Identities = 129/432 (29%), Positives = 217/432 (50%), Gaps = 16/432 (3%)

Query: 4   SLRWLVLGILSSALLLIVIDMTVIYLALPSLTYELRASATEKLWIVNAYALTVAGLLPGM 63
           S RW  L  L+ + LL  +  +V  +ALP+L   L AS  +  W+V AY L +  L+  +
Sbjct: 21  SPRW-ALASLALSTLLASLGASVAAVALPTLAEALGASFQQVQWVVLAYLLAITTLIVSV 79

Query: 64  GALGDRFGHKRMFISGLVVFGWASLGAAFSPTPEILIAARVALAVGAAMMMPATLAIIRH 123
           G LGD  G +++ ++G+ +F  AS     +P+  +L+A R    +GAA+MM  TLA++  
Sbjct: 80  GRLGDLMGRRKLLLAGIALFTLASAVCGLAPSLWLLVAGRALQGLGAAIMMALTLALVGE 139

Query: 124 VFEDTRERALAFGIWAAIASGGAAFGPVVGGVLLEHFWWGSVFIINVPIVLLALVLAVIW 183
              D  +   A G+ A +++ G A GP  GG+L+  F W ++F++N+P+ LL L LA   
Sbjct: 140 TV-DQEKTGSAMGLLATLSAVGTALGPSFGGMLISGFGWPALFLVNIPLGLLTLGLAWYS 198

Query: 184 VPSR--PGNPQ-RPFDLLASLWVMGALVGLTLAIKEAGKADPSLLQASVAACTAVVCALA 240
           +P R  P  P+   FD+  +L +   L    L++  +G+     L  ++    A+V    
Sbjct: 199 LPVREVPPKPEGTRFDVTGTLLLAVTLATYALSM-TSGRGSFGGLNLAL-LLIALVGGGL 256

Query: 241 FLRRQRQTAVPMIDFTLFRDRSFSAGVITASVASAALMGMELVVSQRLQLVVGLSPLQAG 300
           F+R Q +   P+I   +FRDRS  +G++T+++ +  +M   LV    L + + L     G
Sbjct: 257 FIRAQSRAVSPLIPLKVFRDRSLVSGLVTSALVATVMMATLLVGPFYLSITLALPAAFVG 316

Query: 301 LTILPIPLGAFIVGPLAGLALPRIGAERILSTSLALSAAGALLY-----LLGYAGEQWLQ 355
           L +   P  A + G  AG  + R G   +    LA    G L+       LG  G  +L 
Sbjct: 317 LALAVGPSVAALAGVPAGRLVDRFGVHPMRVAGLANMVLGCLMLSLVPPTLGTVG--YLA 374

Query: 356 ILSFSLLGFGVGAAMTAASSAMLLQAPADRAGMAASIEEVSYELGGALGIAILGSLMSAV 415
            +  + LG+      TA ++A++    A R G+ A +  +S  LG   G ++LG++ +A 
Sbjct: 375 AIVVTTLGYAF--FQTANNTAVMADVAAQRRGVIAGLLNLSRNLGFFTGASVLGAVFAAA 432

Query: 416 YAAAIVTPGTMA 427
            A   +T  + A
Sbjct: 433 AATNDITGASPA 444