Pairwise Alignments

Query, 492 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

Subject, 514 a.a., transmembrane-transport protein from Sinorhizobium meliloti 1021

 Score =  272 bits (695), Expect = 2e-77
 Identities = 171/481 (35%), Positives = 264/481 (54%), Gaps = 7/481 (1%)

Query: 3   SSLRWLVLGILSSALLLIVIDMTVIYLALPSLTYELRASATEKLWIVNAYALTVAGLLPG 62
           S   W+ L +LS A L+  +D++V++LA+P++  +L  SA++ LWI + Y   VAG L  
Sbjct: 12  SRREWVGLCVLSIACLIYSMDLSVLFLAVPAIVADLDPSASQLLWINDIYGFMVAGFLVT 71

Query: 63  MGALGDRFGHKRMFISGLVVFGWASLGAAFSPTPEILIAARVALAVGAAMMMPATLAIIR 122
           MG LGDR G +R+ + G   FG AS  AAFS TP  LI AR  L +  A + P+TL++I 
Sbjct: 72  MGTLGDRIGRRRVLLMGAFAFGVASAFAAFSNTPGQLILARALLGIAGATIAPSTLSLIV 131

Query: 123 HVFEDTRERALAFGIWAAIASGGAAFGPVVGGVLLEHFWWGSVFIINVPIVLLALVLAVI 182
           ++F++  ER  A  IW    + G   GP++GG+LL++F WGSVF+IN+P++LL L +A  
Sbjct: 132 NLFKNEAERNRAISIWGTAFALGGLVGPLIGGILLQYFHWGSVFLINIPVMLLLLAVAPF 191

Query: 183 WVPSRPGNPQRPFDLLASLWVMGALVGLTLAIKEAGKADPSLLQASVAACTAVVCALAFL 242
            +P    N     DLL+ +  +  ++ +    K    AD   L   V     ++  L F+
Sbjct: 192 LLPEYKNNDAGRLDLLSVVLSLATVLPIIYGFKHMA-ADGFQLAQIVYIGLGLLVGLLFV 250

Query: 243 RRQRQTAVPMIDFTLFRDRSFSAGVITASVASAALMGMELVVSQRLQLVVGLSPLQAGLT 302
           RRQR+ + P++D  LFR  +F+A ++        + G+ L  +  LQLV+GLSPL+A L 
Sbjct: 251 RRQRRLSDPLVDLALFRVPAFTASLMVNLAGVFFVFGVFLFQNLFLQLVLGLSPLEAALW 310

Query: 303 ILPIPLGAFIVGPLAGLALPRIGAERILSTSLALSAAGALLYLLGYAGEQWLQILSFS-L 361
             P  L   ++   A     R G  R +   L ++AAGA    +    E  + IL  S +
Sbjct: 311 SAPSALVFAVMSFQAYRFTNRFGPVRTVLGGLLVNAAGAAAMAIAAYAESLIGILGSSMI 370

Query: 362 LGFGVGAAMTAASSAMLLQAPADRAGMAASIEEVSYELGGALGIAILGSLMSAVYAAAIV 421
           +GFG    +   +  ++  AP +RAG A++I E S E GGALGIA+LGSL + +Y  A+ 
Sbjct: 371 IGFGFVPVVLTTTGLIVGTAPPERAGSASAISETSAEFGGALGIAVLGSLATLIYRMAMN 430

Query: 422 TPGTMALPDLALD----SLDGALIAAEALPEAIAAPLISLAKGAFDNAFA-AVMIAVVAL 476
                +L  +  +    +L GA+  A ++P + +A  +  AK  F   FA   ++A V L
Sbjct: 431 RADLSSLNPVQAEAVSATLAGAVETARSMPGSTSAVWLETAKSGFSLGFAICCVVATVTL 490

Query: 477 L 477
           L
Sbjct: 491 L 491