Pairwise Alignments

Query, 196 a.a., Predicted integral membrane protein from Pseudomonas stutzeri RCH2

Subject, 99 a.a., conserved hypothetical protein YCF19 from Synechococcus elongatus PCC 7942

 Score = 59.3 bits (142), Expect = 2e-14
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)

Query: 103 LIGITGLFLNIFFWALIISVILSWVAPGSHNPGAQLVSQLCEPVLAPFRRLLPNLGGLDI 162
           L+    + LNI+F  LII V+LSW      +    ++ QL +P L  FRR++P LGG+D 
Sbjct: 9   LLNTLSITLNIYFVLLIIRVLLSWFPNFQSSQFMLILGQLTDPYLNLFRRVIPPLGGMDF 68

Query: 163 SPIFAFLTIKLLDMLVVNNLATMT 186
           SPI AF  ++ +    V  LA  T
Sbjct: 69  SPILAFFILQAVTQ-AVQQLAVQT 91



 Score = 37.7 bits (86), Expect = 7e-08
 Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 6/95 (6%)

Query: 4  LSQALILVIQTLGSLYLLIVLLRFILQLVRADFYN-PLSQFIV---KATHPLLRPMRRII 59
          +S +L L++ TL S+ L I  +  I++++ + F N   SQF++   + T P L   RR+I
Sbjct: 2  MSSSLGLLLNTL-SITLNIYFVLLIIRVLLSWFPNFQSSQFMLILGQLTDPYLNLFRRVI 60

Query: 60 PSMGTLDLSSLILALIVQMVLMTLILLIAYGTTGN 94
          P +G +D S ++   I+Q V    +  +A  T+G+
Sbjct: 61 PPLGGMDFSPILAFFILQAVTQA-VQQLAVQTSGS 94