Pairwise Alignments

Query, 714 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

Subject, 669 a.a., ATP-dependent DNA helicase from Methanococcus maripaludis S2

 Score = 51.2 bits (121), Expect = 2e-10
 Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 18/256 (7%)

Query: 453 FDIEVNASPILAAETLRRNLWNVAFGALVTSATLTALNSFDRYRMRAGLPKGAVTAVVPS 512
           F +  N   IL    L     N  +G          L     + ++ G+ +   T ++ S
Sbjct: 366 FVVYKNNGSILCEPVLVSTYLNRLYGDASVVHCSATLGDLKIHAIKTGMGRSE-TLLLDS 424

Query: 513 PFHHADAGVLRVPD---LKADPRDAAAHTAAIVR---ELPALVEGARG-TLVLFSSRKQM 565
           PF      ++ + D   +K +  D  ++     +    L  +V  A+G TL+LF S   +
Sbjct: 425 PFSKDRRNIIALSDGEDMKFNSIDFQSNNKKRNKANENLFKMVNAAKGNTLILFKSFGDL 484

Query: 566 QDVFDG-LERDWRRRVLIQGNLSKQETLNKHKARVDDGESSVLFGLASFAEGVDLPGAYC 624
           +   +  L+  +R  +    +    +   K K         +L     FAEGVD+PG   
Sbjct: 485 KTAHEYFLDAGYRGNIYCYESGMDGKAAKKLKEDFQK-YGGLLLATGRFAEGVDIPGDAL 543

Query: 625 EHVVIAKIPFAVPDDPV---EAALAEWIGAR-----GGNPFMEIAVPDASLRLVQACGRL 676
             V+I  +PF VP   +   +  L E + +R       + F+  +    +  ++Q  GRL
Sbjct: 544 TCVIIDSLPFPVPTPLLKREQTLLEERLKSRKVKDAHWSAFLMTSFHIMARTVIQMIGRL 603

Query: 677 LRTETDRGTITLLDRR 692
           +RTETD G + + D+R
Sbjct: 604 IRTETDYGVVVIQDKR 619



 Score = 47.8 bits (112), Expect = 2e-09
 Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 6/75 (8%)

Query: 58  VAVEAGTGTGKTVAYSLAAIPTAKAAGKRLVIATATVALQEQIVHKDLPDLMRNSGLNFS 117
           + VEA TG GKT++Y + A+  A+  GKR++I T T+  QE+IV +DL  L  N  ++F 
Sbjct: 40  LVVEAPTGVGKTLSYLIPALYFAE-RGKRVMILTETIDQQERIV-EDLNSLKHNLKVSFM 97

Query: 118 FALAKGRGRYLCLSK 132
                G+G + C +K
Sbjct: 98  M----GKGNFFCKAK 108