Pairwise Alignments

Query, 714 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

Subject, 674 a.a., helicase c2 (RefSeq) from Shewanella sp. ANA-3

 Score =  208 bits (530), Expect = 6e-58
 Identities = 187/659 (28%), Positives = 295/659 (44%), Gaps = 90/659 (13%)

Query: 60  VEAGTGTGKTVAYSLAAIPTAKAAGKRLVIATATVALQEQIVHKDLPDLMRNSGLNFSFA 119
           +EAGTG GKT AY + AI     +GK+++++T +  LQEQ+  KDLP L    G+    A
Sbjct: 84  IEAGTGVGKTFAYLIPAI----LSGKQVIVSTGSKNLQEQLFLKDLPALTSMLGIAPKLA 139

Query: 120 LAKGRGRYLCLSKLDLLLQEGQAQSATAQLFEEEGFRIEVDERSQKLFTSMIEKLAGNRW 179
           L KGR  YLC  +LD  +QE  A    A+L ++                  I + AG   
Sbjct: 140 LLKGRNNYLCQHRLDKQMQE--ASHIEARLLDD---------------LLKINQWAGMSK 182

Query: 180 DGDRDSWPEELGDSDWSQLTTDHSQ-CTGRHCPNFQQCAFYKAREGMTKVDVIVTNHDMV 238
           DGD         +S    L     + C G+ C  +  C   KAR       +IV NH + 
Sbjct: 183 DGDIGGLTSVAENSPALPLVVSTKETCLGQRCEFYDACFTRKARGRAMDAKIIVVNHHLF 242

Query: 239 LADLAL---GGGAVLPDPRETIYVFDEGHHLPDKAIGHFAHFTRLRSTADWLGQVEKNLT 295
            AD  L   G   +LPDP   + +FDE H LPD  + +F   +  R+       ++  L 
Sbjct: 243 FADSVLKDTGFAELLPDP--DVVIFDEAHLLPDICVSYFGQQSSSRT-------IDDYLQ 293

Query: 296 KLLAQHPLP-GELGRLVEGIPELARELRTQQQFMFSACEQLADFKAGEDMEGRERPRHRF 354
           KLL  +     + G++ +       +L      +FS+ E           + R +  ++ 
Sbjct: 294 KLLQIYQTELSDTGQIAQFCQRCLTKLSDWHNALFSSGES----------DWRLQLGNKS 343

Query: 355 VGGVVPEHLVELGTELKKGFAKLTDLFTRIAELLKEDMDGETGSGIASHQAEEWYPLFGS 414
           +     + L EL         KL  +    +ELL +                        
Sbjct: 344 IALASWDLLAEL-----TALQKLLLVHVGRSELLDD-----------------------I 375

Query: 415 LLTRSQGNWELWTAFTVEDPEDSPPMARWLTLAEGGALFDIEVNASPI-LAAETLRRNLW 473
            +  ++ N +L   F  ++P+ +  +       E G+ F + +  SPI +A E  +  + 
Sbjct: 376 AVKLTELNHKLNQFFNCDNPQAAYSV-------EFGSRF-VMLRMSPINIARECQQLFVA 427

Query: 474 NVAFGALVTSATLTALNSFDRYRMRAGLPKGAVTAVVPSPFHHADAGVLRVPDLKADPRD 533
           N ++  + TSATL    S D +    G+   A   ++ SPF +    +  VP    +  +
Sbjct: 428 NTSW--IFTSATLQVNRSLDHFAQELGI-SDAKAHILDSPFDYPRQALFCVPRQLGNVTN 484

Query: 534 AAAHTAAIVRELPALVEGARG-TLVLFSSRKQMQDVFDGLERDWRRRVLIQGNLSKQETL 592
                  +V      +E A+G T +LF+S K ++     L    +  +L+QG   KQ  L
Sbjct: 485 QQQALKQLVDVCVKAIEAAQGRTFILFTSHKMLEQTALALRTRTQYPLLVQGQAGKQSLL 544

Query: 593 NKHKARVDDGESSVLFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDDPVEAALAEWIGAR 652
            K +       ++VL G +SF EGVD+ G     V+I K+PF  PD+P+  A A+ I  +
Sbjct: 545 TKFRQL----GNAVLLGTSSFWEGVDVRGKLLSCVIIDKLPFVSPDEPLYRARADNISRQ 600

Query: 653 GGNPFMEIAVPDASLRLVQACGRLLRTETDRGTITLLDRRVVTQRYGKAILNALPPFRR 711
           GG+PF ++++P A + L Q  GRL+R E D G + L D R+V + YG+A LN+LPP  R
Sbjct: 601 GGDPFTQVSLPQAIIALKQGVGRLIRDEKDCGVLILCDNRIVNRAYGQAFLNSLPPMSR 659