Pairwise Alignments

Query, 499 a.a., Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit from Pseudomonas stutzeri RCH2

Subject, 531 a.a., Probable NADH dehydrogenase I (chain N) NuoN (NADH-ubiquinone oxidoreductase chain N) from Mycobacterium tuberculosis H37Rv

 Score =  126 bits (316), Expect = 2e-33
 Identities = 113/404 (27%), Positives = 178/404 (44%), Gaps = 26/404 (6%)

Query: 97  ASRGDDERGPNFHALYQFQLLGINGAFL---TGDLFNLFVFFEILLISSYALLLHGHGQR 153
           A R  +  G     L+   +L + G  +   + DL  +FV  E+L +  Y +      +R
Sbjct: 138 AERQAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLSLPLYLMCGLARNRR 197

Query: 154 RV--RAGMHYVVLNLLGSSLFLIGVSMLYGLLGTLNMADMAGRVSAAEPADAPLLAAAGY 211
            +   A M Y +L    S+ FL GV++LYG  GTL +  +  R + A   D  +  A   
Sbjct: 198 LLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGI--RDALAARTDDSMALAGVA 255

Query: 212 LLLVVFALKGAILPLYFWLPRAYASATAPVAALFAIMTKVGLY-AIVRVFTLVFGSEAGE 270
           LL V    K   +P + W+P  Y  A  P+    A  TKV  + A++RV  +        
Sbjct: 256 LLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGALLRVVYVA------- 308

Query: 271 LSNMVEVW---LWPLALLTLGAAVIGALAARNLQVLLAYLVVVSVGTLLAGIALGTDVGL 327
           L  + + W   LW +A+LT+    + A+   N++ +LAY  V  VG +L G+      GL
Sbjct: 309 LPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGVIADNPAGL 368

Query: 328 AAALYYLVHSTLVAGGLFLLADLIARQRGDLGT---DLVSAPALRQ-PLLLGSLFFMGAI 383
           +A L+YLV  +    G F +  L+    G  G+   DL     L Q   ++G +  M  +
Sbjct: 369 SATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVGVMLSMFLL 428

Query: 384 SVAGLPPFSGFLGKVMLLRAIDVGPDAIALWAVVLVGGLGMLIALSRAGSLVFWRHASEA 443
           + AG+P  SGF+ K  + RA      A+ L  V ++          R    +F+   S  
Sbjct: 429 AFAGIPLTSGFVSKFAVFRAA-ASAGAVPLVIVGVISSGVAAYFYVRVIVSMFFTEESGD 487

Query: 444 VGQVADPIRVVATAGLLLASVALVAAAGPLQAFMQAT--AAQLL 485
              VA P  V++ A + + +V  V      Q  +     AAQLL
Sbjct: 488 TPHVAAP-GVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLL 530



 Score = 25.8 bits (55), Expect = 0.004
 Identities = 80/359 (22%), Positives = 133/359 (37%), Gaps = 86/359 (23%)

Query: 153 RRVRAGMHYVVLNLLG---SSLFLIGVSMLYGLLGTLNMADMAGRVSAAEPADAPLLAAA 209
           R +    H  VL  +    ++LFL G  +L  ++  + MA+ + RVS   P     LA A
Sbjct: 62  RSIHGSGHAAVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVS---PQRQNTLAVA 118

Query: 210 GYLLLVVFALKGAILPLYFWLPRAYASATAPVAALFAIMTKVGLYAIVRVFTLVFGSEA- 268
               L  F  + + +P                                       GS+A 
Sbjct: 119 RLPGLDSFTPQASAVP---------------------------------------GSDAE 139

Query: 269 --GELSNMVEVWLWPLALLTLGAAVIGALAARNLQVLLAYLVVVSVGT-LLAGIALGTD- 324
              E +   +  L+PLA+L++G  ++   A+ +L  +   L V+S+   L+ G+A     
Sbjct: 140 RQAERAGATQTELFPLAMLSVGGMMVFP-ASNDLLTMFVALEVLSLPLYLMCGLARNRRL 198

Query: 325 -----------VGLAAALYYLVHSTLVAGGLFLLADLIARQRGDLGTDLVSAPALRQPLL 373
                      +G  ++ ++L    L+ G    L     R      TD   A A    L 
Sbjct: 199 LSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDALAARTDDSMALAGVALLA 258

Query: 374 LGSLFFMGAIS--------VAGLP-PFSGFLGKV-------MLLRAIDVGPDAI------ 411
           +G LF +GA+           G P P +GF+           LLR + V    +      
Sbjct: 259 VGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAATKVAAFGALLRVVYVALPPLHDQWRP 318

Query: 412 ALWAV-VLVGGLGMLIALSRAGSLVFWRHASEA-VGQVADPIRVVATAGLLLASVALVA 468
            LWA+ +L   +G + A+++        ++S A VG +   +     AGL      LVA
Sbjct: 319 VLWAIAILTMTVGTVTAVNQTNVKRMLAYSSVAHVGFILTGVIADNPAGLSATLFYLVA 377