Pairwise Alignments

Query, 531 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  207 bits (527), Expect = 8e-58
 Identities = 130/327 (39%), Positives = 201/327 (61%), Gaps = 4/327 (1%)

Query: 172 ASQQLWVALGSTLCILLLVILGRIAGMNWLMLQ-IDELRGRLEKVSQGDFSAPLQVRHAD 230
           A  Q ++ +G    I+ LV++G    ++  ++Q +D ++  ++KV+QGD +A + V    
Sbjct: 179 AVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVL-GK 237

Query: 231 DEMGMITLAYNRLLGQVGE-MIKGVRQAADDADAQCVRMAGLAGDSARNVEGQQAEIDQV 289
           DE+G++    N  +  V + +++ V+ A+  A+A  +R+A  A ++++ V  Q+ ++ Q+
Sbjct: 238 DELGIVAQRINNSIAAVHDALVESVQSASSVAEA-AIRIASSAEETSQAVVSQRDQLSQL 296

Query: 290 ATAMNEMLATSHEVARSTVEAANAADVAEQETNAGSTVMNESVGAIRTLSGHVDGLSDVM 349
           ATAMN+M AT  +VA    + A     A +E N G   ++ SV +IR LS  +   +D +
Sbjct: 297 ATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQV 356

Query: 350 QQLVQDSHEIGKVLNVISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQ 409
            +L +   +I +V +VISGI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR+LASRT 
Sbjct: 357 NKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTH 416

Query: 410 SSAKEVGVLVERLQSQATRAGHAMDASRQSSATTLTQIEAAQHALGQIVGAVQTIRGMTN 469
            S  E+  ++ RLQ  A     AM  S+  +A ++   E A   L  IV  +Q +     
Sbjct: 417 HSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKAT 476

Query: 470 QIATAAEEQSQVAEDMNQSLTRIAQVA 496
           QIATAAEEQS VAE+MN++++ I   A
Sbjct: 477 QIATAAEEQSAVAEEMNRNVSGINDAA 503



 Score = 33.1 bits (74), Expect = 3e-05
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 10/93 (10%)

Query: 414 EVGVLVERLQSQATRAGHAMDASRQSSATTLTQIEAAQHALGQIVGAVQTIRGMTNQIAT 473
           E+G++ +R+ +       A+  S QS+++       A+ A+     A +T + + +Q   
Sbjct: 239 ELGIVAQRINNSIAAVHDALVESVQSASSV------AEAAIRIASSAEETSQAVVSQ--- 289

Query: 474 AAEEQSQVAEDMNQSLTRIAQVADQAAGVTQDT 506
             ++ SQ+A  MNQ    +A VA  A    +DT
Sbjct: 290 -RDQLSQLATAMNQMTATVADVAGHAEDTARDT 321