Pairwise Alignments

Query, 300 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

Subject, 310 a.a., Glycine cleavage system transcriptional activator GcvA from Pseudomonas fluorescens FW300-N2E2

 Score =  171 bits (433), Expect = 2e-47
 Identities = 103/294 (35%), Positives = 153/294 (52%), Gaps = 13/294 (4%)

Query: 9   LSALRAFEAAARHESAKQAAEELSVTATAISHQIRSLEESLGVALFLRKPR---KLELTD 65
           L+ALRAFEAAARH+S   AA EL+VT  A+  Q+R+LE  LG++LF R      +L LTD
Sbjct: 7   LNALRAFEAAARHQSFSAAAAELNVTPAAVGQQVRNLESWLGISLFTRASSGTARLMLTD 66

Query: 66  PGRELQQTLETAFDSISGAVERLSAAPRRQAITLSTTPAIAVRWLVPWVCLLRDSHPDID 125
             R     +   FD +S  + RL  A     +T++ +PA A +WL+P +   +  HPD+D
Sbjct: 67  VARVALPDIREGFDRLSIGLARLKDASVHAGLTVTVSPAFASKWLLPRIERFQQDHPDLD 126

Query: 126 LRFHTSHEPVALDGVTADIAIRYGDGRWPGLVAEKLFDNTFVPVCSPHL-----GLRIAE 180
           +   T+   V       D+ +RYG G+WPGL+A  L D    PVC+P       G  IAE
Sbjct: 127 VLLDTNARSVDFQVERIDVGVRYGAGKWPGLIAVHLMDEVMFPVCAPDFPLLKDGKLIAE 186

Query: 181 -LPKHPLIHFRAQAALSAPIHWASWQKLANVPRLDVSAGLVFSDETHAISAAIGAQGVAL 239
            L    LIH  + A       W  W   +    +    GL  ++    + AAI  QG+AL
Sbjct: 187 ALADCTLIHDLSMANDRDYPTWRMWLDASGFTHIKSDHGLRINNSASVLQAAIDGQGLAL 246

Query: 240 MSRQLIEDELREGRLVQPFGPEMEGRP----FHLVYPESRRDDPTVRAVREWVM 289
               ++ D+L  GRL++PF  +    P    +++VY     + P ++A R+W++
Sbjct: 247 ARSVMVRDDLSTGRLIRPFADKGLDCPLTQAYYVVYRAECSELPKIQAFRDWLI 300