Pairwise Alignments

Query, 533 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score =  136 bits (342), Expect = 3e-36
 Identities = 96/319 (30%), Positives = 166/319 (52%), Gaps = 32/319 (10%)

Query: 237 LIGLLGLSLIGLTVYLLVRQLEQRLSVLEGAATRIAAGNLETRVPDVGTDSVGRLAAAFN 296
           ++GL+GL +  +  YL+ R + + L  L+  A  ++ G  + +V     D  G LA AFN
Sbjct: 320 VVGLIGLLIALIVSYLINRGIIKPLEQLKQGAEWVSNGRYDQKVIVDSDDEFGELAKAFN 379

Query: 297 GMA---------------------RHLQRLLAVQREMVSAVAHELRTPVARLRFGLEMSA 335
            MA                       L+ L  ++ E+++ V+HELRTP+  ++  +E+  
Sbjct: 380 KMATQINISDDKLKKHAEELKISYNELKELDKLKSELIAVVSHELRTPLTSIKGYVELVL 439

Query: 336 EAQT---DEARRKYLEGMDGDIDDLDALVDEMLVYSRLERGSPTLNFQQVDLRALVDQVI 392
           +      +++++K L+  D +I  L  L++ ML  S++ERG   +  ++V+LR++V  VI
Sbjct: 440 DGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYREKVNLRSIVCDVI 499

Query: 393 GELAPLRPDVSVRRGECTTAADGSCWAEAEPQYLRRALSNLINNAMRH--AESRVQVSFA 450
             L PL  + +++  +           EA+   + + L+NLI NA++   A   + VS  
Sbjct: 500 EYLKPLATEKNIKLNKEVE----DIAIEADKDRITQVLTNLIENAIKFSPANESILVSGV 555

Query: 451 IEGQTVRLDVDDDGPGVPEADWEKVFTPFLRLDDSRTRASGGHGLGLSIVRRIIYWHSGR 510
           +E + + L V D G G+P+ D EK+F  F ++D S  R  GG GLGL++ + I+  H G 
Sbjct: 556 LEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKG- 614

Query: 511 SQLSHSELG-GARFSLVWP 528
           S    SELG G+ F ++ P
Sbjct: 615 SIWVESELGKGSTFHIILP 633