Pairwise Alignments

Query, 533 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

Subject, 409 a.a., ATPase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  128 bits (322), Expect = 4e-34
 Identities = 108/358 (30%), Positives = 180/358 (50%), Gaps = 32/358 (8%)

Query: 179 SANLDDDQRRRLDEGDTVMALAQGGDAIRVFAAIAGTGWIMQLGPLYQMNPYPPQL---L 235
           S +L ++ +  L  G T+ AL    + +  +     +  I+ LGP+    P P +    L
Sbjct: 62  SLSLPENLQSSLQLGATI-ALRHSSNELYYYRLDKDSSHILVLGPV--QTPVPKERNTSL 118

Query: 236 ILIGLLG-LSLIGLT-VYLLVRQLE--QRLSVLEGAATRIAAGNLETRVPDVGTDS-VGR 290
           IL+GL   L L+ L  ++ + R L   Q+ ++  G A R        R  D+   S +  
Sbjct: 119 ILLGLYSSLCLVALWWIWPVFRDLNHLQQAAIEFGQAPR-------KRPQDIHKHSAIFP 171

Query: 291 LAAAFNGMARHLQRLLAVQREMVSAVAHELRTPVARLRFGLEMSAEAQTDEARRKYLEGM 350
           LA AFN ++  +   + + +E+   ++HE+RTP+AR+RF LE+    Q D     Y   +
Sbjct: 172 LAKAFNSVSHQIVDFIQMHKELSRTISHEVRTPLARMRFALEI-IRPQID---ANYANRL 227

Query: 351 DGDIDDLDALVDEMLVYSRLERGSPTLNFQQVDLRALVDQVIGELAPLRPDVSVRRGECT 410
           + DIDD++ L    L ++RLE    TL+ +   +   ++++  + A  +P  ++      
Sbjct: 228 NEDIDDIEQLAANYLSFARLEHKEETLSQESQSIELFMEKLAHKYAIYQPKFNI------ 281

Query: 411 TAADGSCWAEAEPQYLRRALSNLINNAMRHAESRVQVSFAIEGQTVRLDVDDDGPGVPEA 470
                +  A  +P  +  A+ NL+ NAMR A+  + V F  +    R+ V+DDGPG  E 
Sbjct: 282 VFHYEAQQAHFDPIAMTIAIQNLVQNAMRFAQHDIHVHFHQQRGINRISVEDDGPGF-EG 340

Query: 471 DWEKVFTPFLRLDDSRTRASGGHGLGLSIVRRIIYWHSGRSQLSHSE-LGGARFSLVW 527
             +K+   F R  DS+   + G+GLGL IV++I  WH G  +LS S+ LGGA  S+ W
Sbjct: 341 KGKKLVAAFER--DSQQSDTSGYGLGLYIVKKIATWHYGTLELSRSQALGGAEISISW 396