Pairwise Alignments

Query, 429 a.a., HD-GYP domain from Pseudomonas stutzeri RCH2

Subject, 401 a.a., HDIG domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  214 bits (544), Expect = 5e-60
 Identities = 131/382 (34%), Positives = 201/382 (52%), Gaps = 23/382 (6%)

Query: 20  RRVAVASLELGMYVCELDRPWSETNFAFQGFPLL-TPGEIRKVRSCCDYVYVD---DTRR 75
           +++    L+ GM+V +    W E  + +    L+ +  ++R++R   D  Y++   DTRR
Sbjct: 3   KKIGTVELKPGMFVVDTGISWLENPYLYAHEGLVGSESDVRRIR---DEGYLEVFIDTRR 59

Query: 76  V------------RLQHGVPVATATPRARKPQERTYHALSTEVEEARSAYQDGSQLIEQV 123
                         +  G       P   +PQ      ++ E+ +A   Y    +    +
Sbjct: 60  SLFGRDPDGVSDEEILSGALQQLEDPGVLEPQV----PVAEEMRKATVLYDTTVRYARGI 115

Query: 124 LADVQHGRVIDTRACHGAVKRNLESMLRNESAMLWLIRLKNKDLYTSLHCLSVSIMAMGF 183
           + +++   V+D       V   L S+ RN +A++ L +L+N D YT  HC++V +++M F
Sbjct: 116 MDEMRDKGVVDMSEAEPLVDSMLGSITRNTNALVGLAKLRNVDEYTYTHCINVGLLSMVF 175

Query: 184 GNHLGLQDDKLQLLGMAGLLHDVGKMRIDPQILNKPGKLTSQEFEVIKRHPVFGLEALRA 243
           G HLG     L  LG+AGL HD+GK RI   IL  P +L+  EFEV+K HP  G E +R 
Sbjct: 176 GRHLGFGPVTLARLGLAGLFHDLGKARIPDDILKSPRRLSPDEFEVMKGHPGIGFEYMRE 235

Query: 244 QPGVPEAALHAAYGHHERLDGTGYPLGSGPAQISYMTRIITIVDAFDAITSHRAYDCARP 303
           + GVPE  L   Y HHE+ +G GYP G    QIS   RI+ +VD +DA+TS R Y     
Sbjct: 236 RGGVPEEVLEGVYEHHEKHNGLGYPRGLRGEQISVAGRILAVVDVYDALTSRRVYKEPML 295

Query: 304 VQAAFEILRSGSGRQFDEDLVLEFIRWLGAFPVGTLVELHTGEVAVVVEKHKQFQLRPRV 363
              A  ++    G+ F   LV  FIR LG +PVG++VEL+TG+  VV E + +  L+PRV
Sbjct: 296 PHKALSLMYGMRGQDFSPGLVERFIRCLGIYPVGSVVELNTGQRCVVSEANLRNPLQPRV 355

Query: 364 VVLRDAAKQRCAARYLDLAQVT 385
           +++ D+  + C+ R LDLA  T
Sbjct: 356 LIVHDSKGRPCSPRPLDLAGQT 377