Pairwise Alignments

Query, 394 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

Subject, 368 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (274), Expect = 9e-29
 Identities = 79/277 (28%), Positives = 143/277 (51%), Gaps = 17/277 (6%)

Query: 8   LLIIDDDDVVRASLAAYLDDSGFRVLQAANGPQGMDLFDSEQPDLVICDLRMPQMDGLEL 67
           +L++DDD V R     YL   G++V++A NG  G+      +PDL++CDL MP ++G+E 
Sbjct: 27  ILLVDDDPVFRRMTKGYLQKYGYQVIEAENGLDGLRKLRDHEPDLILCDLSMPVLNGIEF 86

Query: 68  IRQISERQIDLPVIVVSGAGVMSDAVEALRLGAADYLIKPLEDLAMLEHSVRRAL--DRS 125
           + ++S     LP++VVS    M+D  +ALR G  D+L KP+ + + L  ++ + L  D  
Sbjct: 87  VEEVSSSYPSLPLVVVSATEEMADVAKALRFGIKDFLPKPITNHSHLASAIEKVLANDDH 146

Query: 126 RLRLENRRY---REQLETANRDLQASLHLLQEDQDAGRQVQMNMLPVTPWSVDGFDFAHQ 182
           +    +  Y   R+      ++L   L  L+++ +A +++   +LP     +  +  +++
Sbjct: 147 QRDFASCWYGADRQGSIPEEQELHWHLQYLKDNPNAAKELLEALLPEKDSQLGSWKCSYR 206

Query: 183 IIPSLYLSGDFVDYFRVDERRIGFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRGGML 242
           ++ S  L     DY  +   +  FY+ D + H    A  T+L++     L ++  R   L
Sbjct: 207 LLQSAELMPLVFDYAWLMNGQFVFYVVDAASHRECGAASTLLVR----ALFHDYLRN--L 260

Query: 243 REF--KPSEVLDHINRGLINCK--LGKHVTMLGGVID 275
           R F  +  ++ + I RG I+C   +GK V+ L GV D
Sbjct: 261 RNFSVELKDLAEIIERG-IHCSECIGK-VSALFGVAD 295