Pairwise Alignments

Query, 394 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

Subject, 515 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 56/133 (42%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 6   ATLLIIDDDDVVRASLAAYLDDSGFRVLQAANGPQGMDLFDSEQPDLVICDLRMPQMDGL 65
           A +L++DD+ + R +LA  L   G     AANG + ++L      DLV+ DL M  MDGL
Sbjct: 37  ARILVVDDEAIARDNLALALGRQGHETFTAANGAEALELLAGADFDLVLTDLMMQGMDGL 96

Query: 66  ELIRQISERQIDLPVIVVSGAGVMSDAVEALRLGAADYLIKPLEDLAMLEHSVRRALDRS 125
           +L+R +  R  D  V+VV+G   +  AVEA+  GA  YL KP  DL      V++AL++ 
Sbjct: 97  DLLRAVRMRHPDTEVVVVTGYPTVKTAVEAMHAGAYHYLPKPY-DLNEARALVQKALEKR 155

Query: 126 RLRLENRRYREQL 138
           RLR E  R REQL
Sbjct: 156 RLRQEVARLREQL 168