Pairwise Alignments

Query, 394 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

Subject, 491 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  116 bits (291), Expect = 1e-30
 Identities = 64/139 (46%), Positives = 89/139 (64%), Gaps = 1/139 (0%)

Query: 6   ATLLIIDDDDVVRASLAAYLDDSGFRVLQAANGPQGMDLFDSEQPDLVICDLRMPQMDGL 65
           A +LIIDD+D +R SL   L+D GF VL+A +G  G+ L   E PDLV  D+ MP MDGL
Sbjct: 3   ARILIIDDEDGIRFSLRGILEDEGFEVLEAPSGEDGLALLARETPDLVFLDIWMPGMDGL 62

Query: 66  ELIRQISERQIDLPVIVVSGAGVMSDAVEALRLGAADYLIKPLEDLAMLEHSVRRALDRS 125
            ++ Q+  ++ DLPVI++SG G +  AV A+R GA D++ KPL  L  +  + +RAL+  
Sbjct: 63  AVLDQLHAQRPDLPVIMISGHGTIETAVNAIRKGAHDFIEKPL-SLEKVLIAAQRALEYG 121

Query: 126 RLRLENRRYREQLETANRD 144
            LR EN   R+ L TA+ D
Sbjct: 122 DLRRENEALRDSLPTAHAD 140