Pairwise Alignments

Query, 394 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

Subject, 598 a.a., histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  144 bits (363), Expect = 7e-39
 Identities = 68/137 (49%), Positives = 100/137 (72%)

Query: 2   LKPSATLLIIDDDDVVRASLAAYLDDSGFRVLQAANGPQGMDLFDSEQPDLVICDLRMPQ 61
           L  + T+++IDDD +VR S+ AYL+D G+ V +  +G  G+ L  S QPD V+ DLRMP 
Sbjct: 22  LSDAPTVVVIDDDTMVRRSITAYLEDLGYNVHEGTDGRTGLALVRSVQPDAVLVDLRMPG 81

Query: 62  MDGLELIRQISERQIDLPVIVVSGAGVMSDAVEALRLGAADYLIKPLEDLAMLEHSVRRA 121
           +DGL+++R+++  + D+P IVVSG GVM DA+EA+R GA D+++KP+ DL +L H VR A
Sbjct: 82  IDGLDVLRELATERPDMPTIVVSGTGVMQDAIEAVRRGAWDFILKPIMDLEVLGHRVRLA 141

Query: 122 LDRSRLRLENRRYREQL 138
           +++ RLR ENRRY + L
Sbjct: 142 IEQGRLRAENRRYHQNL 158



 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 8/143 (5%)

Query: 9   LIIDDDDVVRASLAAYL-DDSGFRVLQAANGPQGMDLFDSEQPDLVICDLRMPQMDGLEL 67
           +++ +DDV+   LA Y  +  G  V+  ++G + +   + E  DL++ D++MP+MDGLE 
Sbjct: 450 IMVAEDDVINRKLALYFFERMGHDVITVSSGIEVLAGLEREACDLLLMDIQMPEMDGLET 509

Query: 68  IRQISERQ---IDLPVIVVSGAGVMSDAVEALRLGAADYLIKPLEDLAMLEHSVRRALDR 124
           IR +  R+     +PVI ++   +  D    L  G   Y+ KP+ D   L   +   LD 
Sbjct: 510 IRALRGRKGVPSRVPVIAMTAHAMAGDRERFLAEGMDGYVSKPV-DFGCLVAEIENVLDA 568

Query: 125 SRL---RLENRRYREQLETANRD 144
             L    L N R   Q    NR+
Sbjct: 569 RGLLDVSLGNLRSGPQDGAVNRE 591