Pairwise Alignments

Query, 394 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

Subject, 459 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 94.4 bits (233), Expect = 6e-24
 Identities = 54/137 (39%), Positives = 88/137 (64%), Gaps = 3/137 (2%)

Query: 7   TLLIIDDDDVVRASLAAYLDDSGFRVLQAANGPQGM-DLFDSEQPDLVICDLRMPQMDGL 65
           ++LIIDD+  +   L    +  G +   A   P+G+  L D +   +VI D+ MPQ+DG+
Sbjct: 11  SVLIIDDEPHIGTVLVQLFELEGIKAF-ATTDPKGIAKLLDRDWAGVVISDVNMPQLDGI 69

Query: 66  ELIRQISERQIDLPVIVVSGAGVMSDAVEALRLGAADYLIKPLEDLAMLEHSVRRALDRS 125
            L++QI ++  DLPV++++G G ++ AV AL+ GA D+L KP  +  ML+  V+RALD+ 
Sbjct: 70  SLMQQIRQQDPDLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHMLD-VVKRALDKR 128

Query: 126 RLRLENRRYREQLETAN 142
            L LENR+ +++LE+ N
Sbjct: 129 SLTLENRKLKKELESHN 145