Pairwise Alignments

Query, 642 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 999 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  407 bits (1047), Expect = e-118
 Identities = 228/539 (42%), Positives = 328/539 (60%), Gaps = 9/539 (1%)

Query: 85  VFDSTQEGVLVTDPRQRIVHVNPAFSRITGYSTEEVLGQTPKLFASGKHDAEFYQQMWLA 144
           VFD + E +L+ D    IV  N AF+ ++GY+ EE  GQ P   AS  ++ +F  Q+   
Sbjct: 454 VFDHSIEAILILDATGHIVTFNNAFAELSGYTVEESAGQQPDFLASPCNEPDFRAQIRAT 513

Query: 145 LKDKGE-WSGEIWNRRKNGEVYPQWQNLRCIHDNQGQLSHYVAVFSDLSALKRSREELDQ 203
           L D+GE W GE   RRK+G   P W N+  I + QG + + VA  +DLS  K ++ +++ 
Sbjct: 514 L-DRGENWLGEAIARRKDGSDCPVWCNIGAIVNEQGAIVNKVAFVTDLSEKKAAQAQIET 572

Query: 204 LAHYDPLVNLPNRLLFTERAKQDLERARAHKRSGALLLIDLDHFKDINESLGHSLGDALL 263
           L++ D L  LPNR  F+    + L+        GAL+L+DLD    +N++ GH+ GD LL
Sbjct: 573 LSNVDQLTTLPNRQWFSRILGEWLQEGC----QGALVLLDLDQLSRVNDAFGHAAGDELL 628

Query: 264 QAVSTRLSEHLEKGMTLGRLGGDEFALLCEGYGAEKATALALR-ILDRLNESFHIGDQEL 322
           + V  RL + L     LGRLGGD+F +L +G    ++ A  +R +LD L     +   ++
Sbjct: 629 RRVGERLRKGLRPHDILGRLGGDQFGILIDGRDDSRSVATVVRHLLDILAHPIQMQGSDV 688

Query: 323 FSSASIGIVLYPYPTDVQNAEQLMRNADSALFKAKSSGRSTYAFYSEELTSQARQRVELV 382
            ++A  GI L+P   D  +   L+RN D+A+  AK+S  ++Y F++ E+  +  +R+ L 
Sbjct: 689 VTTACAGITLFPQ--DGNDVALLLRNVDTAMHHAKNSNLNSYHFFAPEMNQRVVERLRLE 746

Query: 383 TALRQALEQGQLRLHYQPIYDLRQGTISGFEALVRWQHPEKGLIAPGVFIPIAEETGLIS 442
           + LR AL+  QL LHYQP  ++  G I+GFEAL+RW HPE G+++P  FIP+AEET LI 
Sbjct: 747 SELRLALQLDQLELHYQPQVEIGSGQINGFEALLRWNHPELGMVSPADFIPLAEETRLIL 806

Query: 443 AIDHWVLEQACNQAREWLGQGHPLGFIAVNISSRLFGNGELDLQVATILARSGLEARHLE 502
            I  WVL++AC Q R+W  QG P   +AVN+S+  F   +L   V+  L  SGL  R LE
Sbjct: 807 PIGAWVLKEACRQNRQWQDQGLPPMVVAVNLSALQFQESDLVAMVSAALMTSGLAPRWLE 866

Query: 503 LEITESAVMQDPDAALELLQRLRALGVQLAIDDFGTGYSSLQRLKRMNVHKLKIDQGFVR 562
           LEITES +MQ+P+  + +L+ L+ LGV+L+IDDFGTGYSSL  LKR  + K+KID+ F+R
Sbjct: 867 LEITESVIMQEPERMVGILEELKCLGVRLSIDDFGTGYSSLSYLKRFPIDKIKIDRSFIR 926

Query: 563 GLPDDRDDAAITRSVIGLAHNLGLKVVAEGIETAEQAAFLLAQNCDYGQGYGFARPQPA 621
            +   + DAAI R VI +A  L  KV+AEG+ET EQ  FL    C   QG+  +RP PA
Sbjct: 927 DVVSSQGDAAIVRMVIAMAGELERKVIAEGVETNEQLDFLRLHQCHEFQGFLCSRPVPA 985