Pairwise Alignments

Query, 867 a.a., DNA topoisomerase I, bacterial from Pseudomonas stutzeri RCH2

Subject, 874 a.a., type I DNA topoisomerase from Pantoea sp. MT58

 Score = 1180 bits (3053), Expect = 0.0
 Identities = 582/874 (66%), Positives = 695/874 (79%), Gaps = 8/874 (0%)

Query: 1   MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSANKEPV-----KRGKAAA 55
           MGK+LVIVESPAKAKTINKYLGN YVVKSS+GHIRDLPTSGS  K+       K+ K AA
Sbjct: 1   MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSTAKKSADASTEKKAKDAA 60

Query: 56  AEAPVLSPKEKAKRQLITRMGVDPEHGWKAKYEILPGKEKVIEELRRLAKEADTIYLATD 115
            +  V   K+  K  L++RMGVDP HGW+A Y+ILPGKEKV+ EL+ LA  AD IYLATD
Sbjct: 61  TDKKVKKVKKDEKAALVSRMGVDPYHGWEADYQILPGKEKVVAELKALAANADHIYLATD 120

Query: 116 LDREGEAIAWHLRESIGGDDSRYKRVVFNEITKKAIQEAFSKPGDLDLNRVNAQQARRFL 175
           LDREGEAIAWHLRE IGGDDSR+ RVVFNEITK AI++AF KPG+L+++RVNAQQARRF+
Sbjct: 121 LDREGEAIAWHLREVIGGDDSRFSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFM 180

Query: 176 DRVVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFVPEEYWEVHADLASAQQ 235
           DRVVGYMVSPLLW KIARGLSAGRVQSVAV+LVVEREREI+AFVPEEYWEV+A L++ + 
Sbjct: 181 DRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEVNAALSTPKG 240

Query: 236 AKVRFEVARENGEAFKPLNEAQANAALEKLKGAKYSVSKREDKPTSSKPSAPFITSTLQQ 295
            ++  +V  +  +AF+P+N  +  AA+  L+ A+Y +  REDKPTSSKP AP+ITSTLQQ
Sbjct: 241 DELSMDVTHKGDKAFRPVNRDETYAAVALLEKARYEIVDREDKPTSSKPGAPYITSTLQQ 300

Query: 296 AASNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAIGMVRGFIEGEFGDKYLPEK 355
           AAS RLGFGVKKTMMMAQRLYEAG+ITYMRTDSTNLS DA+ M RG+IE  FG KYLP+ 
Sbjct: 301 AASTRLGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQDAVAMARGYIESNFGKKYLPDN 360

Query: 356 PNVYSSKEGAQEAHEAIRPSDVNLRPTQLSGMERDAERLYELIWRQFVACQMPPAQYLST 415
           P  Y+SKE +QEAHEAIRPSDV++   QL  ME DA++LY+LIWRQFVACQM PA+Y S+
Sbjct: 361 PVTYASKENSQEAHEAIRPSDVDVVAEQLKDMEADAQKLYQLIWRQFVACQMTPAKYDSS 420

Query: 416 SVTVAAGDFELRAKGRILKFDGYTKVMPQQSKAGEDDVLPEMNKGDDMKLLKLDPSQHFT 475
           ++T AAG+F L+AKGRIL+FDG+TKVMP   K  ED  LP ++ GD + L  L P QHFT
Sbjct: 421 TITAAAGEFRLKAKGRILRFDGWTKVMPALRKNDEDRTLPAVSVGDVLDLKALQPGQHFT 480

Query: 476 KPPARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVSLHNRRFYSEKMGDIVTERLS 535
           KPPAR+SEASLV+E+EKRGIGRPSTYAAI STIQDRGYV + NRRFY+EKMG+IVT+RL 
Sbjct: 481 KPPARFSEASLVRELEKRGIGRPSTYAAITSTIQDRGYVRVENRRFYAEKMGEIVTDRLE 540

Query: 536 ESFNNLMDYGFTAGMEEHLDDVAQGERDWKHVLDEFYGDFRKKLEVAE--ASENGMRANQ 593
           E+F  LM+Y FTA ME +LD VA  E  WK VLD F+ DF ++LE+AE    E GM+ NQ
Sbjct: 541 ENFRELMNYDFTARMESNLDQVANNEAQWKAVLDHFFSDFTQQLELAEKDPEEGGMQPNQ 600

Query: 594 PTLTDIPCKVCGRPMMIRTASTGVFLGCSGYSLPPKERCKSTVNLVPGDEIAADDEG-ES 652
             LT I C  C R M IRTASTGVFLGCSGY+LPPKERCK T+NL+P +E+    EG ++
Sbjct: 601 MVLTSIECPTCSRQMGIRTASTGVFLGCSGYALPPKERCKQTINLIPENEVLNILEGDDA 660

Query: 653 ESRVLLGKHRCPICSTAMDAYLLDETQKLHICGNNPDCSGYEIEKGQYRIKGYEGPSLEC 712
           E+  L  + RC  C TAMD+YL+D  +KLH+CGNNP+C GYEIEKG++RIKGY+GP +EC
Sbjct: 661 ETNALRARRRCQKCGTAMDSYLIDNERKLHVCGNNPECDGYEIEKGEFRIKGYDGPIVEC 720

Query: 713 DKCGSEMQLKTGRFGKFFGCTNAECKNTRKLLKNGEAAPPKMDAVKMPELKCEKVDDTYV 772
           +KCGSEM LK GRFGK+  CTN ECKNTRK+L++GE APPK D V +PEL CEK D  +V
Sbjct: 721 EKCGSEMHLKMGRFGKYMACTNEECKNTRKILRSGEVAPPKEDPVPLPELACEKSDAYFV 780

Query: 773 LRDGASGLFLAASQFPKNRETRAPLVRELIPHKDEIDPKYHFLLDAPQKDPEGRFAVIRF 832
           LRDGA+G+FLAA+ FPK+RETRAPLV EL   KD +  K  +L DAP  DPEG  A++RF
Sbjct: 781 LRDGAAGVFLAANTFPKSRETRAPLVEELQRFKDRLPEKLKYLADAPAADPEGNKAMVRF 840

Query: 833 SRKTKEQYVQTEVDGKPTGWKAFYDGGKWKVEDK 866
           SRKTK+QYV +E +GK TGW AFY  GKW+V  K
Sbjct: 841 SRKTKQQYVSSEKEGKATGWSAFYIDGKWQVAKK 874