Pairwise Alignments

Query, 284 a.a., alternative sigma factor RpoH from Pseudomonas stutzeri RCH2

Subject, 285 a.a., alternative sigma factor RpoH from Dechlorosoma suillum PS

 Score =  290 bits (742), Expect = 2e-83
 Identities = 153/270 (56%), Positives = 194/270 (71%), Gaps = 2/270 (0%)

Query: 16  NLEAYVQTVNSLPLLTVEQERELAGRLFYHQDLEAARQMVLAHLRFVVHIARSYSGYGLA 75
           NL+AY+Q     P+L+  +E  LA RL    D++AARQ+VL+HLR V+ IAR Y GYGL 
Sbjct: 17  NLDAYIQAARRFPMLSEAEEFALARRLREEDDVDAARQLVLSHLRLVIAIARGYLGYGLP 76

Query: 76  QADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIRAEIHEFILRNWRIVKVATTKAQRK 135
            ADLIQEGN+GLMKAVKRF+P  GVRLVSFA+HWI+AEIHE+IL+NWR+VKVATTKAQRK
Sbjct: 77  HADLIQEGNIGLMKAVKRFDPSRGVRLVSFAMHWIKAEIHEYILKNWRLVKVATTKAQRK 136

Query: 136 LFFNLRSQKKRLAWLNNDEVTAVADSLGVEPHEVREMESRLTGHDMAFDPAADADDDSAY 195
           LFFNLRS K     L   EV  +A  LGV+  EV EME+R+ G D+A D + D +DD+  
Sbjct: 137 LFFNLRSLKASSDTLTPAEVDEIAYKLGVKAEEVVEMETRMGGRDLALDGSPDDEDDNRV 196

Query: 196 QSPAHYLEDHRYDPARQLEDADWSDSSTSSLHTALEGLDERSRDILQQRWLNEDK-ATLH 254
            +P  YL D   +P + LE  ++    +  L  AL GLDERSR I++ RWL+E+  ATLH
Sbjct: 197 -APIAYLADSAAEPTQVLEAREYDRLQSDGLQQALAGLDERSRRIVEARWLDEENPATLH 255

Query: 255 DLAAKYNVSAERIRQLEKNAMNKLKGSIQA 284
           DLAA++ VSAERIRQ+E  A+ K+KG + A
Sbjct: 256 DLAAEFGVSAERIRQIEVKALQKMKGLLAA 285