Pairwise Alignments

Query, 402 a.a., tryptophan synthase, beta subunit from Pseudomonas stutzeri RCH2

Subject, 396 a.a., tryptophan synthase, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  392 bits (1007), Expect = e-114
 Identities = 196/387 (50%), Positives = 268/387 (69%), Gaps = 2/387 (0%)

Query: 14  NGYFGPYGGQLVPPHLKQAMDDINLAYEEIRQREDFQQELAALFADYVGRPSPIFHARRL 73
           N YFG YGG  VP  L  A+  +  A+ E +  E FQ E   L  +Y GRP+ +   R L
Sbjct: 7   NPYFGEYGGMYVPQILVPALKQLESAFVEAQTDESFQAEFTDLLKNYAGRPTALTLTRNL 66

Query: 74  SEQLGGAQIYLKREDLNHTGAHKINHCLGEALLAKFMGKKKVIAETGAGQHGVALATACA 133
           S      +IYLKREDL H GAHK N  LG+ALLAK MGKK++IAETGAGQHGVA A ACA
Sbjct: 67  SPN-PMVKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATALACA 125

Query: 134 LVGIPCEIHMGQVDIEKEHPNVTKMKILGCKLIAVTRGAATLKEAVDSAFEEYLKDPHNY 193
           L+G+ C+++MG  D+ ++ PNV +M+++G ++I VT G+ATLK+A + A  ++       
Sbjct: 126 LLGLKCKVYMGAKDVARQSPNVFRMRLMGAEVIPVTSGSATLKDACNEAMRDWSGSYEKA 185

Query: 194 IYAIGSVVGPHPFPKMVRDFQSIIGTEAREQFLAKHGRLPDHVVACVGGGSNAMGMFTAF 253
            Y +G+  GPHPFP +VR+FQ IIG E ++Q L + GRLPD V+ACVGGGSNA+GMF  F
Sbjct: 186 HYLLGTAAGPHPFPTIVREFQRIIGEETKKQILEREGRLPDAVIACVGGGSNAIGMFADF 245

Query: 254 LEDAAVELVGIEPAGESLDKPGRHSATLSKGKPSELHGMACYVLEDADGNPSAVHSIASG 313
           +++  VEL+G+EPAG+ +D    H A L  GK     GM   +++D++G     +SI++G
Sbjct: 246 IDETNVELIGVEPAGKGID-THMHGAPLKHGKTGIFFGMKAPLMQDSEGQIEESYSISAG 304

Query: 314 LDYPGVGPQHSYLKDIGRVNYQTATDQECLEAFMTLSRVEGIIPALESAHAVAWAIRTAP 373
           LD+P VGPQH++L  IGR  Y++ATD E LEAF  L+R EGIIPALESAHA+A+A+R A 
Sbjct: 305 LDFPSVGPQHAHLNAIGRARYESATDDEALEAFQLLARCEGIIPALESAHALAYALRLAK 364

Query: 374 TLSEDSHILVNLSGRGDKDADYVANLL 400
             ++++ ++VNLSGRGDKD   V+++L
Sbjct: 365 ECTKETILVVNLSGRGDKDIFTVSDIL 391