Pairwise Alignments

Query, 504 a.a., Flp pilus assembly protein, secretin CpaC from Pseudomonas stutzeri RCH2

Subject, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

 Score =  234 bits (598), Expect = 4e-66
 Identities = 145/438 (33%), Positives = 226/438 (51%), Gaps = 49/438 (11%)

Query: 43  NNSDVQVPIYKSRVLSTRA--SVNRISVGNPAIADILITSPTQLYLLGRSLGSTNVLLWD 100
           +N    + + K + ++ RA    + I +G+P IA +   +    Y+LG  LGST+V ++D
Sbjct: 39  SNFSRSIKVAKGKTVTIRAVQRFDEIVIGDPEIATVTPLTDRSFYILGNELGSTSVTIFD 98

Query: 101 NRNQLIDSLDVEVVHDLGGLKAKLHQVLPNERIEVFSAQGALALRGQVSSAAAMDSAVKL 160
                +  +D+EV  D   L + + Q +P   ++V SA G + L G  + A A   A ++
Sbjct: 99  AEKNPVGIIDIEVTLDTKLLSSTIRQSVPGSSVKVTSANGRIVLSGSATDAVAATQAEQI 158

Query: 161 AQSYAAQASAAESGGAAMQNKPLEVINLLGIGGSQQVMLEVKVAEMQRSLFKNLDVRFNA 220
           A  +A                  EVIN + I  SQQV L V+  E+ R + K L  + +A
Sbjct: 159 ASRFAGDE---------------EVINSIKITSSQQVQLNVRFVEINRDVGKELGTQISA 203

Query: 221 LDFGSSSRWSGGGFNNGLNADGGVLGLNPDGQVDPSKLIGSGKAIFGQFLSENFLFNVVL 280
                +  WS G      N+        P G            ++ G  + E +  +V +
Sbjct: 204 -----AYAWSNGSVE--FNSSPRATSNTPAG------------SLIGSLIGEGYSVDVAI 244

Query: 281 DAAKDNGTAKVLAEPTLTTLTGQQAEFISGGEFPVPVSDDDG-ITIEYKEFGVGVKFLPV 339
           DA +D G A+ LAEP L   +G+ + F++GGEFP+P+S+ DG IT+ YK+FGVG+ F P 
Sbjct: 245 DALEDRGMARRLAEPNLIARSGETSSFLAGGEFPIPISEQDGTITVSYKKFGVGLDFTPT 304

Query: 340 VLDSGRINLNLNVAVSELSNANALMLTTGLGGTNSVGQL-VPSLTKRSAQSTVELGNGQT 398
           VL  G I L++   VS + N            +  VG + +P  + R A+++V+L +GQ+
Sbjct: 305 VLSDGLIALDIEPEVSAIDNT----------ASYRVGNIAIPGFSVRRARTSVDLKSGQS 354

Query: 399 IAIAGLISENSRDYVSRFPGLGDIPVLGQLFRSQQYINGETELVILVTPHLVTPLD-AKA 457
             IAGL+   +     R PGLG +P+LG LF S+ Y   ET+LVI+VTPHLV P+D  K 
Sbjct: 355 FMIAGLLQSENNLITQRVPGLGQLPILGALFSSKAYQRRETDLVIIVTPHLVKPIDPLKK 414

Query: 458 VRLPTENFVEPSDLEFYL 475
           V  P++    P++ EF+L
Sbjct: 415 VASPSDRTKRPTEAEFFL 432