Pairwise Alignments

Query, 426 a.a., signal recognition particle-docking protein FtsY from Pseudomonas stutzeri RCH2

Subject, 450 a.a., signal recognition particle protein Srp54 from Methanococcus maripaludis S2

 Score =  151 bits (382), Expect = 3e-41
 Identities = 94/301 (31%), Positives = 165/301 (54%), Gaps = 18/301 (5%)

Query: 128 LSKTSSSIGEGMASL----FLGKKAIDDDLLDELETRLLTADVGVEATTAIMQNLTRRV- 182
           L K   ++ + +  L    F+ KK + + ++ +++  L+ +DV V+    + + + R+  
Sbjct: 2   LDKLGQNLSDALNKLKNATFVDKKLVKE-VIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60

Query: 183 ---SRKELADSGALYTALQEELAGLLKPVEQPLVVDSGKRPYVILVVGVNGVGKTTTIGK 239
                K L+    +   + +EL  LL    Q L +D  K+  VIL++G+ G GKTT+  K
Sbjct: 61  DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKS-VILLIGIQGSGKTTSAAK 119

Query: 240 LAKKLQLEGKKVMLAAGDTFRAAAVEQLQVWGERNSIPVIAQHTGADSASVIFDAVQAAK 299
           LA+ +Q +G +  L A D +R AA +QL+   E+ ++P+    T      V        K
Sbjct: 120 LARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDET-RTKTPVEITKEGMEK 178

Query: 300 ARGIDVLIADTAGRLHTKDNLMEELKKVRRVMGKLDDSAPHEVLLVLDAGTGQNAINQTR 359
            + +DV+I DTAGR   ++ L+ E+K+++      D + P+E++LV+D   GQ A NQ +
Sbjct: 179 LKKVDVIIIDTAGRHKEEEGLLAEMKEMK------DLTNPNEIILVIDGTLGQQAKNQAK 232

Query: 360 QFNQSV-ELTGLVLTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGIDDLRTFEADAFVKA 418
            F +SV E+  +++TKLDG+AKGG   +   +   PI++IG GEG+D+L  F+   F+  
Sbjct: 233 AFKESVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISR 292

Query: 419 L 419
           +
Sbjct: 293 I 293