Pairwise Alignments

Query, 323 a.a., tRNA-dihydrouridine synthase from Pseudomonas stutzeri RCH2

Subject, 331 a.a., tRNA dihydrouridine synthase DusB from Vibrio cholerae E7946 ATCC 55056

 Score =  129 bits (323), Expect = 1e-34
 Identities = 90/259 (34%), Positives = 141/259 (54%), Gaps = 13/259 (5%)

Query: 3   IALAPMEGLVDEILRDVLTRMGGVDWCVTEFIRVSDRLLPKS-SFRKLAPELTSGAVTRA 61
           + +APM G+ D   R++  R G     V+E +  +  L   + S  ++  E  SG  +  
Sbjct: 21  LIVAPMAGVTDRPFRELCLRYGA-GMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRS-- 77

Query: 62  GTPVRVQLLGSDPVCLADNAAFACALGAPAIDLNFGCPAKTVNKSRGGAVLLKEPELLHA 121
                VQ+ GSDP  +A+ A F+   GA  ID+N GCPAK VNK   G+ LL+ P+++  
Sbjct: 78  -----VQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIED 132

Query: 122 ILCEVRRAVPAHVPVTAKMRLGFDSPD-SAIDCARALVDGGAGQLVVHARTKVEGYKPPA 180
           IL  V  AV  +VPVT K R G+D+ + + +  A+   D G   L +H RT+   YK  A
Sbjct: 133 ILKAVVNAV--NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEA 190

Query: 181 HWEWIARVQEAVSVPVYANGDIWSLADWQRCREVSGAENIMLGRGLVSRPDLARQIA-AA 239
            ++ I  V+ AVS+PV ANGDI S    +   E +GA+ +M+GR    RP + ++I    
Sbjct: 191 EYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHFL 250

Query: 240 KQGLSLPEMSWAEFQPTLV 258
           + G ++PE+  +E +  ++
Sbjct: 251 EHGTTMPELPISEVKDIML 269