Pairwise Alignments

Query, 204 a.a., RNA methyltransferase, RsmD family from Pseudomonas stutzeri RCH2

Subject, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

 Score =  167 bits (424), Expect = 9e-47
 Identities = 88/181 (48%), Positives = 114/181 (62%), Gaps = 1/181 (0%)

Query: 15  GQLRIIGGEWRSRRFSFPDAEGLRPTPDRVRETLFNWIAPYLSGARVLDPFTGSGAIYLE 74
           GQ+RII G WR R+    DAEGLRPT DRV+ETLFNW+A  +  AR LD F GSG +  E
Sbjct: 17  GQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPNARCLDLFAGSGGLGFE 76

Query: 75  ALSRGASMALALDVNANAIASLRKHLDTLNCGHGQLLQSDALRYLDTQSPTPFDLVFLDP 134
             SR A+    L++N  A   L+ ++ +L   + +L+ +DAL +L  QS  P+D+VF+DP
Sbjct: 77  CASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAFL-RQSGKPYDVVFIDP 135

Query: 135 PFNKNLLQPACELLETKGWLAEHAWIYTESEAVPSSLGLPGNWRLHREKKAGKVHYALWE 194
           PF + LLQ   +LLE  GWLA  A IY E E       LP +W LHREK AG+V Y L+ 
Sbjct: 136 PFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHLHREKSAGQVCYRLFI 195

Query: 195 R 195
           R
Sbjct: 196 R 196