Pairwise Alignments

Query, 210 a.a., Uncharacterized protein conserved in bacteria from Pseudomonas stutzeri RCH2

Subject, 281 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 74/271 (27%)

Query: 11  RMVGALVLIALAVIFVP-MLFNREDDLRHVTVDAPTIPAAPVVAE-------IEMQPVD- 61
           R+VG +VL+AL VIF+P +L  +++       + P  P A +          +  Q VD 
Sbjct: 8   RLVGTVVLVALGVIFLPDILDGKKERQEEQFAEIPLRPTAVMQKNTDEMFEVLSAQEVDG 67

Query: 62  ----------------------------VPEPEQEPGSVPEGFEIIEED--------AEP 85
                                        PE + +P S  E  +++ ++        AEP
Sbjct: 68  EGAEPDEASSNDDTALAQAVGADPKSELTPESKPKPESKTELAQVVAKEQAKPQVAKAEP 127

Query: 86  A-------TGPAIAEQAPAPIEPVV----PVAPAAAPAAPAAQ-------AQSPAAEPRL 127
                   T  A AE      +PVV    P  P + P   A         A++ +A+P  
Sbjct: 128 KAEVKEAKTDTAKAEPKKDKPKPVVAKTEPKKPESKPTTVAKTEKPKTETAKTESAKPAK 187

Query: 128 DN-------NNLPVSWAIQLASLSNRASAENLQQTLRSQGYNAYI---RTADG-MNRVFV 176
           D+       ++L     +QL + SN A+ ++L   LR  GY AY       DG + +VFV
Sbjct: 188 DDGIKVVSRDSLKPGLTLQLGAFSNAANVKSLVAQLRKSGYKAYTIPETPKDGVLTKVFV 247

Query: 177 GPLVERSEANRLRDVLQRQQKLDGFVVRFKP 207
           GP V  ++  +++  ++   +L G +V F P
Sbjct: 248 GPDVSEAKLKKVQQEVENLTRLKGRIVPFNP 278