Pairwise Alignments

Query, 329 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas stutzeri RCH2

Subject, 345 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score = 73.6 bits (179), Expect = 7e-18
 Identities = 67/261 (25%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 15  SAFAQAQEKFKV----GYIRVMDDAQAMVAHEAGLYEKHGLNVELIEFSSGTDLIKAIVG 70
           SA AQA EK KV    G   +       +A + G ++  GL VE+ +F+ G   ++A+VG
Sbjct: 25  SAGAQALEKPKVSIAVGGKNLFYYLPLTIAEQLGYFKDEGLQVEISDFAGGAKALQAMVG 84

Query: 71  GQLDTGVLGFTNAVAWASKGADL---KVVGGAQQGYHSILVREDTNIQDVAGLKDRTLAS 127
           G  D     + + +   +K   +    + G A Q   ++  +   N + VA LK + +  
Sbjct: 85  GSADVVSGAYEHTINMQAKNQPIVAFVLQGRAPQIVLAVNNKTMPNYKTVADLKGKKIGV 144

Query: 128 QREGSTADAVLRGVTLKSAGLKPSDVNIMGVSPAV-AVQSLVSGRVDAAFLFEP------ 180
              GS+  +V+    L  AGLKPSDV+ +GV  A  A+ ++ SG++DA    +P      
Sbjct: 145 TAPGSST-SVMASYVLAKAGLKPSDVSFIGVGAAAGAISAVRSGQIDAIANLDPVISMLE 203

Query: 181 YDRIAQLVAPVRQVYEIGEVW--PFPCMVVITSGETLAKRKDAVWKSLDAQREAIEMLDK 238
             +  + +A  R + +  +V+  P P   +      + K  +      +A   A++ + K
Sbjct: 204 QSKEIKTIADTRTLKDTNDVFGGPMPAATLYAPAAFIQKYPNTTQALTNAMVRALKWIQK 263

Query: 239 Q-PAEAAKLI-ASYFIAEPTL 257
             P++  K +  SY + + +L
Sbjct: 264 AGPSDIIKAVPESYLLGDRSL 284