Pairwise Alignments

Query, 296 a.a., cytochrome c oxidase, subunit II from Pseudomonas stutzeri RCH2

Subject, 375 a.a., cytochrome B559 subunit alpha from Pseudomonas fluorescens FW300-N2E3

 Score = 90.9 bits (224), Expect = 4e-23
 Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 47/268 (17%)

Query: 17  VLVLLVVSALWIYAMLRRPQTYTDEQALRINRRWIIGGGLILPTVSIIALLAFGIPTGRG 76
           V+ ++V  A++   ML R  T   + A + +    +   ++   V  I L+A  +P    
Sbjct: 52  VIGIIVFGAMFWSMMLHRRST--GQVAAKFHESTTVE--ILWTVVPFIILVAMAVPATAT 107

Query: 77  MLPLPVEGEQPLRIQVIGHQWWWEVRY-------------PESGV----VTANQFILPAD 119
           ++ +    E  + IQ+ G+QW W  +Y             P+  +         ++L  D
Sbjct: 108 LIKMYDTSEPDIDIQITGYQWKWHYKYLGQDVEFFSNLATPQEQIHNKTAKGENYLLEVD 167

Query: 120 RPVDVE--------VTSADVIHSFWVPRLGGKLDMVPGRTNTLRLQASQAGVFRGQCSEF 171
           +P+ +         VTSADVIHS+WVP    K D +PG  N    +  + G++RGQC+E 
Sbjct: 168 QPLVLPIGAKVRFLVTSADVIHSWWVPAFAVKRDAIPGFVNEAWTRVDKPGIYRGQCAEL 227

Query: 172 CGSQHAHMILHVEALEADAFASWIEARR--------------ELQHQPPSGDAGRVFAER 217
           CG  H  M + V+      + +W+  R+               L      GD  +++   
Sbjct: 228 CGKDHGFMPIVVDVKTQADYDTWLTERKADAAKLKELTSKEWTLDELKERGD--KIYHTT 285

Query: 218 CGQCHRVTGVSEGNRAPDL--SDLATRP 243
           C  CH+  G       P L  S +AT P
Sbjct: 286 CAACHQPEGQGMPPLFPALKGSPIATGP 313