Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  186 bits (473), Expect = 2e-51
 Identities = 135/401 (33%), Positives = 208/401 (51%), Gaps = 23/401 (5%)

Query: 99  LLAFLVYYRDWLPIVVAAATIAVHHLSFFALQQQGAGVFLIPDGNWGEVFLHAFYVVLES 158
           L+A  V   DWL ++V    +    L+   + Q G G+ ++              +V+  
Sbjct: 256 LMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGIL--------------LVMAL 301

Query: 159 AILIYLAIRANAEAREGEALLGAAAAITAHPERIDLSYRSKASGPVTQRFNHLLDQLGEL 218
               ++A + N       AL   A        R+D+  + +  G +  +FN  +D+L ++
Sbjct: 302 LTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEV-GLLADKFNKFVDRLHQM 360

Query: 219 VGAV----VRDTAGLGGTAANLSEATRQMRDGASRQLDETAYMVDAMQQMTVAIDDVAGH 274
           V  V    V  T G    AA+ ++A++++R     Q DE   +  A+ +M  A  ++A +
Sbjct: 361 VKNVREVSVALTQGADHAAASATQASKRIRT----QQDEITMVATAVTEMASATAEIASN 416

Query: 275 ADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHIEGTDRLVQDLAAQSEQIDRVLEVI 334
           A+  A+ A  + Q   +G   +   +  I  LA+ + G  R++ +L   + +I  +L  I
Sbjct: 417 AENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTI 476

Query: 335 RTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTTEIQGIISRLQQGS 394
           R IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR L+Q+T AST EIQ  I+ LQ+ +
Sbjct: 477 RGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVT 536

Query: 395 RKATEAMQNSRDSVGRCVGSSQQTTALLDAIASEIEAISQMNEMIAAATHEQTAVSADMG 454
             A   M  S   V   V    QT A L AI+  I+ IS M   IA+A  EQ+ V+AD+ 
Sbjct: 537 TTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADIN 596

Query: 455 RHLQSVQQVAERNAGDASQLDNDGRQLHELAGRLGGLSGRF 495
            + +SV++V+++ A +A Q     + LH +A  L     RF
Sbjct: 597 VNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRF 637