Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  179 bits (453), Expect = 3e-49
 Identities = 112/305 (36%), Positives = 172/305 (56%), Gaps = 7/305 (2%)

Query: 193 DLSYRSKASGPVTQRFNHLLDQLGELVGAVVRDTAGLGGTAANLSEATRQMRDGASRQLD 252
           +L   + AS  + Q    L+D   E++ AV +    L      +++ + Q  DG   Q  
Sbjct: 245 ELGTLANASEQMQQNLRQLID---EIISAVTQ----LSSAVEEMTQISNQSADGMKEQQY 297

Query: 253 ETAYMVDAMQQMTVAIDDVAGHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHIEG 312
           +   +  AM QM  A+ DVA + + +A  A  A+ K+ EG    + +   I  +A+ I  
Sbjct: 298 QITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGE 357

Query: 313 TDRLVQDLAAQSEQIDRVLEVIRTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNL 372
             + V +L  QS QI+ V++VIR+IADQTNLLALNAAIEAARAGE GRGFAVVADEVR L
Sbjct: 358 AGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTL 417

Query: 373 AQKTAASTTEIQGIISRLQQGSRKATEAMQNSRDSVGRCVGSSQQTTALLDAIASEIEAI 432
           A +T  ST EI  II +LQ  +++A +A + SR S+ +CV     + +L+ +I   I  I
Sbjct: 418 AGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANI 477

Query: 433 SQMNEMIAAATHEQTAVSADMGRHLQSVQQVAERNAGDASQLDNDGRQLHELAGRLGGLS 492
           + +   IA+A  EQ +V+ ++ R+++++   ++  A  + Q     R+L +LA  L    
Sbjct: 478 ADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTL 537

Query: 493 GRFTV 497
            RF +
Sbjct: 538 RRFKI 542