Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  192 bits (487), Expect = 3e-53
 Identities = 110/285 (38%), Positives = 171/285 (60%)

Query: 213 DQLGELVGAVVRDTAGLGGTAANLSEATRQMRDGASRQLDETAYMVDAMQQMTVAIDDVA 272
           D+L + +  +      L   A  L+  T +   G  +Q DE      A+ QMT A+++VA
Sbjct: 257 DKLRDTLQGISGSATQLASAAEELNAVTDESARGLVQQNDEIEQAATAVNQMTSAVEEVA 316

Query: 273 GHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHIEGTDRLVQDLAAQSEQIDRVLE 332
            +A   +QA++ A+  AG+GR+ V    S I  ++  ++GT  L+  LA +S  I +VL+
Sbjct: 317 RNATSTSQASRSAATSAGDGRDLVQETVSAIERMSGDVQGTAELIISLANESRDIGKVLD 376

Query: 333 VIRTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTTEIQGIISRLQQ 392
           VIR +ADQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T  ST+EI+ +IS +Q 
Sbjct: 377 VIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMISSIQT 436

Query: 393 GSRKATEAMQNSRDSVGRCVGSSQQTTALLDAIASEIEAISQMNEMIAAATHEQTAVSAD 452
           G+ +A  +M+NS +     +  ++     L+ I S +E I++ N +IA+A  EQ  V+ +
Sbjct: 437 GTEQAVSSMRNSTERAESTLNIAKGAGQALNTINSAVEEINERNMVIASAAEEQAQVARE 496

Query: 453 MGRHLQSVQQVAERNAGDASQLDNDGRQLHELAGRLGGLSGRFTV 497
           + R+L +++ ++ ++   A+Q      +L  LA  L G+  RF +
Sbjct: 497 VDRNLVNIRDLSAQSTNGANQTSAASTELSRLAIDLNGMVARFAL 541



 Score = 42.4 bits (98), Expect = 4e-08
 Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 24/195 (12%)

Query: 310 IEGTDRLVQDLAAQSEQIDRVLEVIRTIADQTNLLALNAAIEAARAGEQGRGFAVVADEV 369
           I+GTD   + L A     D++ + ++ I+     LA  A    A   E  RG     DE+
Sbjct: 239 IDGTDEAGRLLLAMKTMQDKLRDTLQGISGSATQLASAAEELNAVTDESARGLVQQNDEI 298

Query: 370 RNLAQKTAASTTEIQGIISRLQQGSRKATEAMQNSRD---SVGRCVGSSQQTTALLDAIA 426
              A       T +  + S +++ +R AT   Q SR    S G      Q+T + ++ ++
Sbjct: 299 EQAA-------TAVNQMTSAVEEVARNATSTSQASRSAATSAGDGRDLVQETVSAIERMS 351

Query: 427 SEIEAISQMNEMIAAATHEQTAVSADMGRHLQSVQQVAERN-------AGDASQLDNDGR 479
            +++  +   E+I +  +E    S D+G+ L  ++ +A++        A +A++    GR
Sbjct: 352 GDVQGTA---ELIISLANE----SRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGR 404

Query: 480 QLHELAGRLGGLSGR 494
               +A  +  L+ R
Sbjct: 405 GFAVVADEVRALAHR 419