Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 619 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  182 bits (463), Expect = 2e-50
 Identities = 114/299 (38%), Positives = 168/299 (56%), Gaps = 14/299 (4%)

Query: 213 DQLGELVGAVVRDTAGL----GG----------TAANLSEATRQMRDGASRQLDETAYMV 258
           D+LG+L G+++R T  L    GG           A  LS  T Q   G + Q +ET  + 
Sbjct: 321 DELGQLQGSMMRMTGNLRELIGGLRDGVTQIASAAEQLSAVTEQTSAGVNSQKNETDQVA 380

Query: 259 DAMQQMTVAIDDVAGHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHIEGTDRLVQ 318
            AM +M+  + +VA +A++A+ AA  AS++A EG   VS   ++I  LA  +  +   + 
Sbjct: 381 TAMHEMSATVQEVARNAEQASHAAVNASKEAREGDGVVSKAVAQIEKLATEVTHSKSAMD 440

Query: 319 DLAAQSEQIDRVLEVIRTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAA 378
           DL  +S +I  VL+VI+ +A+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LAQ+T  
Sbjct: 441 DLKNESNKIGGVLDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQT 500

Query: 379 STTEIQGIISRLQQGSRKATEAMQNSRDSVGRCVGSSQQTTALLDAIASEIEAISQMNEM 438
           ST EI  +IS L   + +    + NS+      V  ++     ++ +   I  I  MN  
Sbjct: 501 STEEIAALISGLHTRTAQVATILDNSQALTANSVELTRNAGVSINNMTQAISTIETMNHQ 560

Query: 439 IAAATHEQTAVSADMGRHLQSVQQVAERNAGDASQLDNDGRQLHELAGRLGGLSGRFTV 497
           IAAA  EQ+AV+ ++ R + +V+ ++E+ A  + +      +L  L   L  L  RF V
Sbjct: 561 IAAAAEEQSAVAEEINRSVLNVRDISEQTASASEETAASSVELARLGVHLQSLVSRFRV 619



 Score = 41.2 bits (95), Expect = 1e-07
 Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 18/209 (8%)

Query: 163 YLAIRANAEAREGEALLGAAAA--------ITAHPERID-LSYRSKASGPVTQRFNHLLD 213
           + A+ A+ EAREG+ ++  A A        +T     +D L   S   G V      + +
Sbjct: 402 HAAVNASKEAREGDGVVSKAVAQIEKLATEVTHSKSAMDDLKNESNKIGGVLDVIKAVAE 461

Query: 214 QLGELV--GAVVRDTAGLGGTA-ANLSEATRQMRDGASRQLDETAYMVDAMQQMTVAIDD 270
           Q   L    A+    AG  G   A +++  R +        +E A ++  +   T  +  
Sbjct: 462 QTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQTSTEEIAALISGLHTRTAQVAT 521

Query: 271 VAGHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHIEGTDRLVQDLAAQSEQIDRV 330
           +  ++      +   ++ AG   N ++   S I T+   I       ++ +A +E+I+R 
Sbjct: 522 ILDNSQALTANSVELTRNAGVSINNMTQAISTIETMNHQIAAA---AEEQSAVAEEINRS 578

Query: 331 LEVIRTIADQTNLLALNAA---IEAARAG 356
           +  +R I++QT   +   A   +E AR G
Sbjct: 579 VLNVRDISEQTASASEETAASSVELARLG 607