Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 506 a.a., chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  441 bits (1135), Expect = e-128
 Identities = 252/489 (51%), Positives = 318/489 (65%), Gaps = 6/489 (1%)

Query: 11  HYLKADRIMLGVIWFLVAYSFAIAAFYGNWAQAFVIGGLTAVAVTTLHMLIPGQRLLRCV 70
           HY KADRIMLG+IW L  Y+  +A ++  + QA V+GG TAV +T L+  I G RL+RC 
Sbjct: 18  HYRKADRIMLGLIWLLFIYALGLAFWFDTFTQAVVVGGGTAVVLTGLYRAIGGTRLMRCC 77

Query: 71  IGAAFMVLAALHINQAHGMLEMHFGIFALLAFLVYYRDWLPIVVAAATIAVHHLSFFALQ 130
            G   MV+ ALHINQ HG +E+HFGIF LLA L +YRDWLPI+VAA TIA+HH+ F ALQ
Sbjct: 78  FGVGLMVMTALHINQTHGQVEIHFGIFVLLAVLTFYRDWLPILVAAVTIALHHIGFHALQ 137

Query: 131 QQGAGVFLIPDG-NWGEVFLHAFYVVLESAILIYLAIRANAEAREGEALLGAAAAITAHP 189
             G  V+++  G  W  V +HA YVV+ESAIL+YLA++  AEA E + +L    A T   
Sbjct: 138 HSGFPVYVMHHGFGWSMVLVHAVYVVVESAILVYLAVQNQAEAVENQDMLDRMLATTNQF 197

Query: 190 ERIDLSYRSKASGP---VTQRFNHLLDQLGELVGAVVRDTAGLGGTAANLSEATRQMRDG 246
                S  S+ SG    + QRF   L Q+  LV  VVRDT GLG    +L++A+  +  G
Sbjct: 198 STDGQS--SQQSGKHVSLAQRFEQFLAQITGLVDGVVRDTRGLGELGHDLAKASGTLETG 255

Query: 247 ASRQLDETAYMVDAMQQMTVAIDDVAGHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTL 306
           A  QL E A M  AMQ+M  A++D++ H  +A Q A  AS +   GR++V   +SEI  L
Sbjct: 256 AQHQLSEIARMTGAMQRMGDAMNDISSHVAQAVQRAGDASDQVAHGRDSVDRAQSEITQL 315

Query: 307 AEHIEGTDRLVQDLAAQSEQIDRVLEVIRTIADQTNLLALNAAIEAARAGEQGRGFAVVA 366
           A  I  TD  VQ LA QSEQI +VL+VI +IA+QTNLLALNAAIEAARAGEQGRGFAVVA
Sbjct: 316 AARITTTDETVQALANQSEQIGKVLDVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVVA 375

Query: 367 DEVRNLAQKTAASTTEIQGIISRLQQGSRKATEAMQNSRDSVGRCVGSSQQTTALLDAIA 426
           DEVRNLAQ+TAAST EIQ II  LQ+GSR+A  AM +S   VGRCV  SQ+ +  L A+ 
Sbjct: 376 DEVRNLAQRTAASTKEIQTIIEDLQKGSRQAATAMSDSLQGVGRCVEDSQRASQSLRAVG 435

Query: 427 SEIEAISQMNEMIAAATHEQTAVSADMGRHLQSVQQVAERNAGDASQLDNDGRQLHELAG 486
             I  I+Q+N +IA  T +Q+AVS +M   L+SVQ +AE  A +   L    + L  LA 
Sbjct: 436 EGIGHITQLNGLIATTTEQQSAVSREMADQLRSVQTIAEHTAANIGVLATSSQSLSPLAI 495

Query: 487 RLGGLSGRF 495
           RL  L   F
Sbjct: 496 RLEALGKSF 504