Pairwise Alignments

Query, 497 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  206 bits (524), Expect = 2e-57
 Identities = 116/300 (38%), Positives = 178/300 (59%)

Query: 196 YRSKASGPVTQRFNHLLDQLGELVGAVVRDTAGLGGTAANLSEATRQMRDGASRQLDETA 255
           +R    G + +  N +++ L  ++  +    + LG +A  L+E TRQ  D   +Q  ET 
Sbjct: 240 FRDDELGHIAKDLNGVVNHLKGILKNIAEAASTLGDSADELNEFTRQANDRMFKQQSETE 299

Query: 256 YMVDAMQQMTVAIDDVAGHADRAAQAAQGASQKAGEGRNAVSGVRSEIGTLAEHIEGTDR 315
               AM +MT A+ +VA  ++ AA++A+ A + A  G + V    S +  LA  I+GT  
Sbjct: 300 QTATAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIVQQSISSMSVLASQIQGTAA 359

Query: 316 LVQDLAAQSEQIDRVLEVIRTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQK 375
           ++ +LA +S+ I RVL+VI++IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LAQ+
Sbjct: 360 VIGELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQR 419

Query: 376 TAASTTEIQGIISRLQQGSRKATEAMQNSRDSVGRCVGSSQQTTALLDAIASEIEAISQM 435
           T+ ST EI+ +I  LQQG + A  +M+     V     S+    + L  I + +++I+Q+
Sbjct: 420 TSESTREIESMIESLQQGVKSAVNSMEQGIAQVDNANESTNAAGSALQDIVASVDSITQL 479

Query: 436 NEMIAAATHEQTAVSADMGRHLQSVQQVAERNAGDASQLDNDGRQLHELAGRLGGLSGRF 495
           N  IA A  EQ+ V+  + + + ++  +A+ +   A+ L     QL +LAG +    G F
Sbjct: 480 NTHIATAADEQSCVAESINQSIIAISDIAQESTQAANDLSEAVHQLAQLAGHMRTQVGTF 539